Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24125	Col4a3bp	procollagen, type IV, alpha 3 (Goodpasture antigen) binding protein	13		68018
Gene Ontology	kinase activity | protein serine/threonine kinase activity | transferase activity
Human Homolog	COL4A3BP[collagen, type IV, alpha 3 (Goodpasture antigen) binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (2) GAATATGCCT TTACAATCAC (2) TTGGAGAAAG (3) TTTTTGATGA 57.1 0.0571 Cb medulloblastoma GAAAAAAAAA (2) TTACAATCAC (2) TTGGAGAAAG (3) 198.8 0.1988 P8 GC+1d culture GAAAAAAAAA (2) TTACAATCAC (2) TTTTTGATGA 54.8 0.0548 P8 GC+SHH+1d culture GAAAAAAAAA (2) TTACAATCAC (2) TTGGAGAAAG (3) TTTTTGATGA 92.5 0.0925 3T3 fibroblasts TTTTTGATGA 14 0.014 E15 cortex GAAAAAAAAA (2) TTTTTGATGA 64.3 0.0643 P1 cortex GAAAAAAAAA (2) GAATATGCCT TTTTTGATGA 90.9 0.0909 Hypothalamus GAAAAAAAAA (2) GAATATGCCT TTACAATCAC (2) TTGGAGAAAG (3) TTTTTGATGA 83.3 0.0833 E12.5 retina GAAAAAAAAA (2) TTTTTGATGA 88.2 0.0882 E14.5 retina GAAAAAAAAA (2) TTGGAGAAAG (3) TTTTTGATGA 47.3 0.0473 E16.5 retina GAAAAAAAAA (2) TTGGAGAAAG (3) TTTTTGATGA 32.5 0.0325 E18.5 retina GAAAAAAAAA (2) TTACAATCAC (2) TTGGAGAAAG (3) TTTTTGATGA 83.7 0.0837 P0.5 retina GAAAAAAAAA (2) TTTTTGATGA 49 0.049 P2.5 retina GAAAAAAAAA (2) TTACAATCAC (2) TTGGAGAAAG (3) TTTTTGATGA 105.6 0.1056 P4.5 retina GAAAAAAAAA (2) TTACAATCAC (2) TTGGAGAAAG (3) TTTTTGATGA 67.3 0.0673 P6.5 retina GAAAAAAAAA (2) TTACAATCAC (2) TTTTTGATGA 50 0.05 P10.5 crx- retina GAAAAAAAAA (2) TTACAATCAC (2) TTGGAGAAAG (3) TTTTTGATGA 24.2 0.0242 P10.5 crx+ retina GAAAAAAAAA (2) TTACAATCAC (2) TTTTTGATGA 48 0.048 Adult retinal GAAAAAAAAA (2) TTACAATCAC (2) 26 0.026 ONL GAAAAAAAAA (2) TTACAATCAC (2) TTGGAGAAAG (3) TTTTTGATGA 38.2 0.0382