| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATTTTTCTTT (3) CAAGGAAATG CCTTTAGTCC (2) TCCTTTCTAT TGACTGACAT
| 24.4 | 0.0244 |
| Cb medulloblastoma | ATTTTTCTTT (3) CAAGGAAATG
| 6.9 | 0.0069 |
| P8 GC+1d culture | AAGCCGTTGA ATTTTTCTTT (3) CAAGGAAATG CCTTTAGTCC (2) GAAAAGTCCA (4) GAGTTTAAAT TAAAAGGAGA TCTTCAGAGT
| 26.1 | 0.0261 |
| P8 GC+SHH+1d culture | ATTTTTCTTT (3) CAAGGAAATG CCTTTAGTCC (2) GAAAAGTCCA (4) TAAAAGGAGA TGACTGACAT TGTTTGTTGG (2)
| 18.7 | 0.0187 |
| 3T3 fibroblasts | CAAGGAAATG
| 3.5 | 0.0035 |
| E15 cortex | ATTTTTCTTT (3) CCTTTAGTCC (2) GAAAAGTCCA (4)
| 29.6 | 0.0296 |
| P1 cortex | ATTTTTCTTT (3) CCTTTAGTCC (2) GAAAAGTCCA (4)
| 63.7 | 0.0637 |
| Hypothalamus | AAGCCGTTGA ATTTTTCTTT (3) CAAGGAAATG CCTTTAGTCC (2) TAAAAGGAGA TGACTGACAT
| 19.8 | 0.0198 |
| E12.5 retina | ATTTTTCTTT (3) CAAGGAAATG CCTTTAGTCC (2) TGACTGACAT
| 16.9 | 0.0169 |
| E14.5 retina | ATTTTTCTTT (3) CCTTTAGTCC (2) GAAAAGTCCA (4)
| 20 | 0.02 |
| E16.5 retina | ATTTTTCTTT (3) CAAGGAAATG CCTTTAGTCC (2) GAAAAGTCCA (4) TCCTTTCTAT TCTTCAGAGT
| 28.9 | 0.0289 |
| E18.5 retina | ATTTTTCTTT (3) CAAGGAAATG CCTTTAGTCC (2) GAAAAGTCCA (4) GAGTTTAAAT TGACTGACAT TGGGTGCAAT
| 30.9 | 0.0309 |
| P0.5 retina | ATTTTTCTTT (3) CAAGGAAATG CCTTTAGTCC (2) GAAAAGTCCA (4)
| 29.6 | 0.0296 |
| P2.5 retina | AAGCCGTTGA ATTTTTCTTT (3) CAAGGAAATG CCTTTAGTCC (2) GAAAAGTCCA (4) GAGTTTAAAT TAAAAGGAGA TGACTGACAT
| 52.9 | 0.0529 |
| P4.5 retina | ATTTTTCTTT (3) CCTTTAGTCC (2) GAAAAGTCCA (4) TCCTTTCTAT
| 25.9 | 0.0259 |
| P6.5 retina | ATTTTTCTTT (3) CAAGGAAATG CCTTTAGTCC (2) TCTTCAGAGT
| 31.6 | 0.0316 |
| P10.5 crx- retina | ATTTTTCTTT (3) CAAGGAAATG CCTTTAGTCC (2) GAAAAGTCCA (4)
| 44.6 | 0.0446 |
| P10.5 crx+ retina | ATTTTTCTTT (3) CAAGGAAATG CCTTTAGTCC (2) GAAAAGTCCA (4) TGGGTGCAAT TGTTTGTTGG (2)
| 26.9 | 0.0269 |
| Adult retinal | ATTTTTCTTT (3) CAAGGAAATG CCTTTAGTCC (2) GAAAAGTCCA (4) TGTTTGTTGG (2)
| 27.9 | 0.0279 |
| ONL | ATTTTTCTTT (3) CAAGGAAATG CCTTTAGTCC (2) GAAAAGTCCA (4) TGGGTGCAAT
| 44.1 | 0.0441 |