Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.242459	Cops5	COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	1	1 3.6 cM	26754
Gene Ontology	protein binding | regulation of transcription, DNA-dependent | signalosome complex | transcription coactivator activity | transcription factor complex
Human Homolog	COPS5[COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACTGATGTC GATGGAATAA (2) GTCACAAACT 11.4 0.0114 Cb medulloblastoma AAACTGCCAC (2) GACTGATGTC GATGGAATAA (2) GCTGATGCTC (2) 16.1 0.0161 P8 GC+1d culture GAATGATTTC (3) GACTGATGTC GATGGAATAA (2) GCTGATGCTC (2) GTCACAAACT 22.8 0.0228 P8 GC+SHH+1d culture GACTGATGTC GATGGAATAA (2) GCTGATGCTC (2) GTCACAAACT 22.2 0.0222 3T3 fibroblasts GACTGATGTC 3.5 0.0035 E15 cortex GACTGATGTC 4.9 0.0049 P1 cortex GACTGATGTC GATGGAATAA (2) 13.6 0.0136 Hypothalamus AAACTGCCAC (2) GACTGATGTC TGATGATCAC (2) TGTTTCTAAG 9 0.009 E12.5 retina GACAGTTTCG GACTGATGTC GCTGATGCTC (2) TGTTTCTAAG 18.8 0.0188 E14.5 retina GACTGATGTC 5.5 0.0055 E16.5 retina GACAGTTTCG GACTGATGTC GCTGATGCTC (2) TGATGATCAC (2) 10.8 0.0108 E18.5 retina GAATGATTTC (3) GACTGATGTC GCTGATGCTC (2) TGATGATCAC (2) 9 0.009 P0.5 retina GACTGATGTC GCTGATGCTC (2) 11.8 0.0118 P2.5 retina GACTGATGTC GCTGATGCTC (2) TGATGATCAC (2) 12.4 0.0124 P4.5 retina GAATGATTTC (3) GACTGATGTC GATGGAATAA (2) GCTGATGCTC (2) 13.9 0.0139 P6.5 retina GAATGATTTC (3) GACTGATGTC GATGGAATAA (2) GCTGATGCTC (2) 11.7 0.0117 P10.5 crx- retina GACAGTTTCG GACTGATGTC 13 0.013 P10.5 crx+ retina AAACTGCCAC (2) GACTGATGTC GCTGATGCTC (2) GTCACAAACT 15.3 0.0153 Adult retinal GAATGATTTC (3) GACTGATGTC GATGGAATAA (2) GCTGATGCTC (2) 13.1 0.0131 ONL GCTGATGCTC (2) GTCACAAACT 3.8 0.0038