Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.244068	Arhgef7	Rho guanine nucleotide exchange factor (GEF7)	8		54126
Mm.244068	AU019559	expressed sequence AU019559	8		102225
Mm.244068	4933413I22Rik	RIKEN cDNA 4933413I22 gene	8		71140
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAACCCCCA (3) GGAATCTTAC GTCTGGGGGG (2) 8.2 0.0082 Cb medulloblastoma CCAACCCCCA (3) CTGATAGCAC (3) GTCTGGGGGG (2) 20.8 0.0208 P8 GC+1d culture CAGGAAAAAC CCAACCCCCA (3) CTGATAGCAC (3) GGAATCTTAC GTCTGGGGGG (2) 26.2 0.0262 P8 GC+SHH+1d culture CAGGAAAAAC CCAACCCCCA (3) CTGCGGTGTA (3) GGAATCTTAC GTCTGGGGGG (2) 14.1 0.0141 3T3 fibroblasts GGCAGCAGTG (2) 3.5 0.0035 E15 cortex CTGATAGCAC (3) GGCAGACAGT (2) GGCAGCAGTG (2) GTCTGGGGGG (2) 19.6 0.0196 P1 cortex CCAACCCCCA (3) GGCAGACAGT (2) GTCTGGGGGG (2) 27.2 0.0272 Hypothalamus AAGGGGGTTG (3) CTGCGGTGTA (3) GGAATCTTAC GGCAGACAGT (2) GTCTGGGGGG (2) 16.2 0.0162 E12.5 retina CAGTGACTGA (4) CCAACCCCCA (3) GGAATCTTAC 5.7 0.0057 E14.5 retina AAGGGGGTTG (3) GGAATCTTAC 3.6 0.0036 E16.5 retina CCAACCCCCA (3) 3.6 0.0036 E18.5 retina CCAACCCCCA (3) GGAATCTTAC GGCAGACAGT (2) 14.5 0.0145 P0.5 retina CCAACCCCCA (3) CTGATAGCAC (3) CTGCGGTGTA (3) GGAATCTTAC 13.7 0.0137 P2.5 retina CCAACCCCCA (3) CTGCGGTGTA (3) GGAATCTTAC GTCTGGGGGG (2) 14.1 0.0141 P4.5 retina CAGGAAAAAC CCAACCCCCA (3) GGAATCTTAC GTCTGGGGGG (2) 17.9 0.0179 P6.5 retina CCAACCCCCA (3) CTGCGGTGTA (3) GGCAGACAGT (2) GGCAGCAGTG (2) 11.8 0.0118 P10.5 crx- retina GTCTGGGGGG (2) 1.9 0.0019 P10.5 crx+ retina CAGGAAAAAC CCAACCCCCA (3) CTGATAGCAC (3) CTTTCTTTGT GGAATCTTAC GTCTGGGGGG (2) 30.8 0.0308 Adult retinal CAGGAAAAAC CCAACCCCCA (3) CTTTCTTTGT GGAATCTTAC GTCTGGGGGG (2) 20.5 0.0205 ONL AAGGGGGTTG (3) CAGGAAAAAC CAGTGACTGA (4) 7.6 0.0076