Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.244183	Usp52	ubiquitin specific protease 52	10		103135
Gene Ontology	3'-5' exoribonuclease activity | cytoplasm | exonuclease activity | hydrolase activity | mRNA catabolism, exonucleolytic | peptidase activity | poly(A) tail shortening
Human Homolog	USP52[ubiquitin specific protease 52]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGGTGACTC GTGCCAAGGA TTTTAGTAAG 6.5 0.0065 Cb medulloblastoma GTGCCAAGGA TGCCCAGGAC (2) TTTTATAAAA 13.8 0.0138 P8 GC+1d culture ATGGTGACTC GTGCCAAGGA TGCCCAGGAC (2) TTTTAGTAAG TTTTATAAAA 12.5 0.0125 P8 GC+SHH+1d culture ACCAGCATTG ATGGTGACTC GTGCCAAGGA TGCCCAGGAC (2) TTTTATAAAA 17.5 0.0175 3T3 fibroblasts ACCAGCATTG ATGGTGACTC TGCCCAGGAC (2) 14 0.014 E15 cortex GTGCCAAGGA TGCCCAGGAC (2) 9.8 0.0098 P1 cortex AATTTGATGC (3) GAGAAATCTT GTGCCAAGGA TTTTAGTAAG TTTTATAAAA 36.3 0.0363 Hypothalamus ACCAGCATTG GTGCCAAGGA TGCCCAGGAC (2) TTTTAGTAAG 19.8 0.0198 E12.5 retina ATGGTGACTC GTGCCAAGGA TTTTATAAAA 7.6 0.0076 E14.5 retina ACAGCATTGA ATGGTGACTC GTGCCAAGGA TTTTATAAAA 14.6 0.0146 E16.5 retina ACAGCATTGA ATGGTGACTC GAGAAATCTT GTGCCAAGGA TGCCCAGGAC (2) TTTTATAAAA 18 0.018 E18.5 retina ATGGTGACTC GTGCCAAGGA TTTTATAAAA 21.8 0.0218 P0.5 retina ATGGTGACTC TTTTATAAAA 5.9 0.0059 P2.5 retina GTGCCAAGGA TTTTATAAAA 22.9 0.0229 P4.5 retina GTGCCAAGGA TGCCCAGGAC (2) TTTTAGTAAG TTTTATAAAA 17.9 0.0179 P6.5 retina ATGGTGACTC GAGAAATCTT GTGCCAAGGA TTTTATAAAA 20 0.02 P10.5 crx- retina ACCAGCATTG GTGCCAAGGA TTTTAGTAAG TTTTATAAAA 27.9 0.0279 P10.5 crx+ retina GTGCCAAGGA 17.3 0.0173 Adult retinal ATGGTGACTC GTGCCAAGGA TGCCCAGGAC (2) TTTTAGTAAG 11.3 0.0113 ONL AATTTGATGC (3) GTGCCAAGGA TTTTATAAAA 15.3 0.0153