Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.244187
Tnfrsf9
tumor necrosis factor receptor superfamily, member 9
4
4 75.5 cM
21942
Mm.244187
A930040I11Rik
RIKEN cDNA A930040I11 gene
4
78440
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 26 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACTCCTGGAC
(
2
)
GATGAAGGAC
(
3
)
GGGAACAACT
GGTTTCCCCC (
2
)
11.4
0.0114
Cb medulloblastoma
ACTCCTGGAC
(
2
)
GGGAACAACT
9.2
0.0092
P8 GC+1d culture
GGGAACAACT
1.1
0.0011
P8 GC+SHH+1d culture
GGGAACAACT
GGTTTCCCCC (
2
)
7.1
0.0071
3T3 fibroblasts
ACTCCTGGAC
(
2
)
GGGAACAACT
10.5
0.0105
E12.5 retina
GATGAAGGAC
(
3
)
GGGAACAACT
GGTTTCCCCC (
2
)
5.7
0.0057
E18.5 retina
GGGAACAACT
1.8
0.0018
P0.5 retina
ACTCCTGGAC
(
2
)
GGGAACAACT
4
0.004
P2.5 retina
ACTCCTGGAC
(
2
)
3.5
0.0035
P4.5 retina
GGGAACAACT
2
0.002
P6.5 retina
ACTCCTGGAC
(
2
)
GGGAACAACT
3.4
0.0034
P10.5 crx- retina
ACTCCTGGAC
(
2
)
1.9
0.0019
P10.5 crx+ retina
ACTCCTGGAC
(
2
)
7.7
0.0077
Adult retinal
ACTCCTGGAC
(
2
)
7.4
0.0074
ONL
ACTCCTGGAC
(
2
)
GGGAACAACT
7.6
0.0076
