Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24449	5930405J04Rik	RIKEN cDNA 5930405J04 gene	10		68094
Gene Ontology	nucleus
Human Homolog	SMARCC2[SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAATGAAAC 6.5 0.0065 Cb medulloblastoma AAAATGAAAC AGACTGGCAA GAGACCACCG (2) 18.4 0.0184 P8 GC+1d culture AAAATGAAAC CAGAGAATTT CCCAGCAGAG GAGACCACCG (2) GTTGCTGTTT TACACAAAGA TGGAAGGCTT 16.9 0.0169 P8 GC+SHH+1d culture GCTGCATTCC GTTGCTGTTT TACACAAAGA 7 0.007 3T3 fibroblasts ACGAGCAGCA GAGACCACCG (2) GTTGCTGTTT TACACAAAGA 17.5 0.0175 E15 cortex CCCAGCAGAG 4.9 0.0049 P1 cortex GCTGCATTCC GTTGCTGTTT 18.1 0.0181 Hypothalamus AAAATGAAAC AGACTGGCAA GAGACCACCG (2) 7.2 0.0072 E12.5 retina ACGAGCAGCA CCCAGCAGAG TACACAAAGA 5.7 0.0057 E14.5 retina ACGAGCAGCA GAGACCACCG (2) GCTGCATTCC GTTGCTGTTT TACACAAAGA 10.8 0.0108 E16.5 retina AAAATGAAAC GCTGCATTCC 5.4 0.0054 E18.5 retina AAAATGAAAC CCCAGCAGAG GCTGCATTCC 9.1 0.0091 P0.5 retina ACTTTTCTCA GAGACCACCG (2) GTTGCTGTTT 7.9 0.0079 P2.5 retina ACGAGCAGCA CAGAGAATTT CCCAGCAGAG GCTGCATTCC GTTGCTGTTT 9 0.009 P4.5 retina AAAATGAAAC CAGAGAATTT GTTGCTGTTT 6 0.006 P6.5 retina ACGAGCAGCA ACTTTTCTCA GTTGCTGTTT 18.3 0.0183 P10.5 crx- retina AAAATGAAAC ACTTTTCTCA CAGAGAATTT CCCAGCAGAG GTTGCTGTTT TACACAAAGA 11.4 0.0114 P10.5 crx+ retina ACTTTTCTCA CAGAGAATTT CCCAGCAGAG GCTGCATTCC TGGAAGGCTT 13.3 0.0133 Adult retinal AAAATGAAAC ACTTTTCTCA CAGAGAATTT GAGACCACCG (2) GCTGCATTCC GTTGCTGTTT 31.7 0.0317 ONL AAAATGAAAC ACTTTTCTCA GTTGCTGTTT TGGAAGGCTT 9.5 0.0095