Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24452	Echs1	enoyl Coenzyme A hydratase, short chain, 1, mitochondrial	7		93747
Gene Ontology	catalytic activity | enoyl-CoA hydratase activity | fatty acid metabolism | long-chain-enoyl-CoA hydratase activity | lyase activity | metabolism | mitochondrion | mitochondrion
Human Homolog	ECHS1[enoyl Coenzyme A hydratase, short chain, 1, mitochondrial]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCGTGGCCTG GGTGGGGAAA 3.2 0.0032 Cb medulloblastoma CCGTAAAAAA (2) GCGTGGCCTG TGCCAAAAAA 25.4 0.0254 P8 GC+1d culture CCGTAAAAAA (2) GCGTGGCCTG GTTAGTATAC TGCCAAAAAA 12.5 0.0125 P8 GC+SHH+1d culture CCGTAAAAAA (2) GCGAAAGAAT GCGGCCCTGC TGCAGAAAAA TGCCAAAAAA 14 0.014 3T3 fibroblasts GCGTGGCCTG 10.5 0.0105 E15 cortex GCGGCCCTGC GCGTGGCCTG TGCCAAAAAA 19.7 0.0197 P1 cortex GGTGGGGAAA 4.5 0.0045 Hypothalamus CCGTAAAAAA (2) GCGTGGCCTG 7.2 0.0072 E12.5 retina CCGTAAAAAA (2) GCGTGGCCTG TGCCAAAAAA 7.6 0.0076 E14.5 retina CCAGGTGCTG (2) CCGTAAAAAA (2) GCGAAAGAAT GGTGGGGAAA 9 0.009 E16.5 retina CCGTAAAAAA (2) GTTAGTATAC TGCCAAAAAA 5.4 0.0054 E18.5 retina CCGTAAAAAA (2) TGCCAAAAAA 16.4 0.0164 P0.5 retina CCGTAAAAAA (2) GCGTGGCCTG GTTAGTATAC TGCCAAAAAA 13.9 0.0139 P2.5 retina CCGTAAAAAA (2) GCGAAAGAAT GCGTGGCCTG TGCCAAAAAA 12.4 0.0124 P4.5 retina CCGTAAAAAA (2) GCGTGGCCTG 6 0.006 P6.5 retina CCAGGTGCTG (2) TGCCAAAAAA 3.4 0.0034 P10.5 crx- retina CCAGGTGCTG (2) CCGTAAAAAA (2) GGTGGGGAAA TGCAGAAAAA 9.4 0.0094 P10.5 crx+ retina CCGTAAAAAA (2) GCGTGGCCTG 9.6 0.0096 Adult retinal CCAGGTGCTG (2) CCGTAAAAAA (2) TGCCAAAAAA 9.3 0.0093 ONL GCGTGGCCTG TGCCAAAAAA 7.6 0.0076