Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.244549	Slc6a9	solute carrier family 6 (neurotransmitter transporter, glycine), member 9	4	4 D2.1 (4 52.0 cM)	14664
Gene Ontology	amino acid transport | amino acid transporter activity | integral to membrane | integral to plasma membrane | membrane | neurotransmitter transport | neurotransmitter:sodium symporter activity | sodium:amino acid transporter activity | symporter activity | transport
Human Homolog	SLC6A9[solute carrier family 6 (neurotransmitter transporter, glycine), member 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 8 In Situ Hybridization Images

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SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTGTCAGCA CCTTTAATCC (3) 53.8 0.0538 Cb medulloblastoma CCTTTAATCC (3) 41.6 0.0416 P8 GC+1d culture CCCAGCCCCT CCTTTAATCC (3) TGCCCGTCCC (3) 34.2 0.0342 P8 GC+SHH+1d culture CCTTTAATCC (3) 25.8 0.0258 3T3 fibroblasts CCTTTAATCC (3) 70.1 0.0701 E15 cortex CCTTTAATCC (3) 54.4 0.0544 P1 cortex CCTTTAATCC (3) 154.5 0.1545 Hypothalamus CCTTTAATCC (3) TGCCCGTCCC (3) 21.7 0.0217 E12.5 retina CCCAGCCCCT CCTTTAATCC (3) 80.7 0.0807 E14.5 retina CCTTTAATCC (3) 120.3 0.1203 E16.5 retina CCTTTAATCC (3) 68.8 0.0688 E18.5 retina CCTTTAATCC (3) 23.6 0.0236 P0.5 retina CCCAGCCCCT CCTTTAATCC (3) 74.6 0.0746 P2.5 retina CCTTTAATCC (3) TGCCCGTCCC (3) 72.2 0.0722 P4.5 retina CCCAGCCCCT CCTTTAATCC (3) GACTGAGGCC TGCCCGTCCC (3) 53.5 0.0535 P6.5 retina CCTTTAATCC (3) TGCCCGTCCC (3) 81.7 0.0817 P10.5 crx- retina CCCAGCCCCT CCTTTAATCC (3) 65.1 0.0651 P10.5 crx+ retina CCTTTAATCC (3) TGCCCGTCCC (3) 40.3 0.0403 Adult retinal CCTGTCAGCA CCTTTAATCC (3) GACTGAGGCC TGCCCGTCCC (3) 151.9 0.1519 ONL CCCAGCCCCT CCTGTCAGCA CCTTTAATCC (3) TGCCCGTCCC (3) 91.9 0.0919