| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) AGTCAAAAAA (2)
| 205.5 | 0.2055 |
| Cb medulloblastoma | AAAAAAAAAA (2) AGCGTGGTGG (3) AGTCAAAAAA (2) GTGATCCTGC
| 825.5 | 0.8255 |
| P8 GC+1d culture | AAAAAAAAAA (2) AGCGTGGTGG (3) AGTCAAAAAA (2) TTGTGAATAT (3)
| 214.5 | 0.2145 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) AGCGTGGTGG (3) AGTCAAAAAA (2) GTGATCCTGC TTGTGAATAT (3)
| 295.1 | 0.2951 |
| 3T3 fibroblasts | AAAAAAAAAA (2) AGCGTGGTGG (3)
| 42 | 0.042 |
| E15 cortex | AAAAAAAAAA (2)
| 212.8 | 0.2128 |
| P1 cortex | AAAAAAAAAA (2) AGCGTGGTGG (3) AGTCAAAAAA (2)
| 254.4 | 0.2544 |
| Hypothalamus | AAAAAAAAAA (2) AGCGTGGTGG (3) AGTCAAAAAA (2)
| 134 | 0.134 |
| E12.5 retina | AAAAAAAAAA (2) AGCGTGGTGG (3) AGTCAAAAAA (2)
| 144.6 | 0.1446 |
| E14.5 retina | AAAAAAAAAA (2) AGTCAAAAAA (2)
| 105.6 | 0.1056 |
| E16.5 retina | AAAAAAAAAA (2) AGTCAAAAAA (2) TTGTGAATAT (3)
| 47.1 | 0.0471 |
| E18.5 retina | AAAAAAAAAA (2) AGCGTGGTGG (3) AGTCAAAAAA (2)
| 387.4 | 0.3874 |
| P0.5 retina | AAAAAAAAAA (2) AGCGTGGTGG (3) AGTCAAAAAA (2)
| 123.7 | 0.1237 |
| P2.5 retina | AAAAAAAAAA (2) AGTCAAAAAA (2)
| 337.9 | 0.3379 |
| P4.5 retina | AAAAAAAAAA (2) AGCGTGGTGG (3) AGTCAAAAAA (2) TTGTGAATAT (3)
| 289.3 | 0.2893 |
| P6.5 retina | AAAAAAAAAA (2) AGCGTGGTGG (3) AGTCAAAAAA (2)
| 280.1 | 0.2801 |
| P10.5 crx- retina | AAAAAAAAAA (2) AGCGTGGTGG (3) AGTCAAAAAA (2)
| 65.1 | 0.0651 |
| P10.5 crx+ retina | AAAAAAAAAA (2) AGCGTGGTGG (3) AGTCAAAAAA (2)
| 103.8 | 0.1038 |
| Adult retinal | AAAAAAAAAA (2) AGCGTGGTGG (3) AGTCAAAAAA (2)
| 70.4 | 0.0704 |
| ONL | AAAAAAAAAA (2) AGCGTGGTGG (3) AGTCAAAAAA (2)
| 109.1 | 0.1091 |