Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.245340	E430016L07Rik	RIKEN cDNA E430016L07 gene	19		319697
Mm.245340	Atrnl1	attractin like 1	19		226255
Gene Ontology	cellular_component unknown | G-protein coupled receptor protein signaling pathway | protein binding
Human Homolog	ATRNL1[attractin-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGCCGTCCAT CGTGGCTCCC (2) GCTCGGAGCT (2) GTGCTGTGAG TAAAGTGTCC (3) 16.3 0.0163 Cb medulloblastoma AAATTGGCAG (2) CACTCAAAAA CAGGACAAAG (2) CGCCGTCCAT TAAAGTGTCC (3) 25.3 0.0253 P8 GC+1d culture AAATTGGCAG (2) CAGGACAAAG (2) CGTGGCTCCC (2) GTGCTGTGAG TAAAGTGTCC (3) 10.2 0.0102 P8 GC+SHH+1d culture CACTCAAAAA CAGGACAAAG (2) GTGCTGTGAG TAAAGTGTCC (3) 11.7 0.0117 3T3 fibroblasts AAATTGGCAG (2) GTTCGAATCC (2) 10.5 0.0105 E15 cortex AAATTGGCAG (2) ATGCTGAGGA (2) GCTCGGAGCT (2) GTGCTGTGAG GTTCGAATCC (2) 39.5 0.0395 P1 cortex CAGGACAAAG (2) 9.1 0.0091 Hypothalamus CAGGACAAAG (2) TAGAGTGTCC (3) 7.2 0.0072 E12.5 retina CAGGACAAAG (2) GTGCTGTGAG 7.5 0.0075 E14.5 retina CAGGACAAAG (2) GTGCTGTGAG TAAAGTGTCC (3) 12.7 0.0127 E16.5 retina CAGGACAAAG (2) GTGCTGTGAG TAAAGTGTCC (3) TAGAGTGTCC (3) 12.6 0.0126 E18.5 retina CAGGACAAAG (2) GTGCTGTGAG TCATCGTAAC (2) 14.5 0.0145 P0.5 retina ATGCTGAGGA (2) CAGGACAAAG (2) GTGCTGTGAG TAAAGTGTCC (3) TAGAGTGTCC (3) TCATCGTAAC (2) 19.8 0.0198 P2.5 retina ATGCTGAGGA (2) CAGGACAAAG (2) GCTCGGAGCT (2) GTGCTGTGAG TAAAGTGTCC (3) 19.4 0.0194 P4.5 retina CAGGACAAAG (2) GTGCTGTGAG TCATCGTAAC (2) 11.9 0.0119 P6.5 retina ATGCTGAGGA (2) CAGGACAAAG (2) GTGCTGTGAG TAAAGTGTCC (3) 15.1 0.0151 P10.5 crx- retina AAATTGGCAG (2) CAGGACAAAG (2) 11.2 0.0112 P10.5 crx+ retina CAGGACAAAG (2) CGTGGCTCCC (2) TAAAGTGTCC (3) TCATCGTAAC (2) 11.5 0.0115 Adult retinal CAGGACAAAG (2) GCTCGGAGCT (2) GTGCTGTGAG TAGAGTGTCC (3) 7.6 0.0076 ONL CGTGGCTCCC (2) TAGAGTGTCC (3) 3.8 0.0038