Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.245500
D9Ertd809e
DNA segment, Chr 9, ERATO Doi 809, expressed
9
9 48.0 cM
52436
Mm.245500
B130005I07Rik
RIKEN cDNA B130005I07 gene
9
320615
Human Homolog
KIAA1117[KIAA1117]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 23 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGATGAATA
(
2
)
3.3
0.0033
Cb medulloblastoma
TTGGTTTTGA
2.3
0.0023
P8 GC+1d culture
CTGATGAATA
(
2
)
GCCTCCGTAA
(
2
)
TTGGTTTTGA
5.7
0.0057
P8 GC+SHH+1d culture
CTGATGAATA
(
2
)
1.2
0.0012
Hypothalamus
GCCTCCGTAA
(
2
)
1.8
0.0018
E12.5 retina
AAACTGGAGA
(
3
)
1.9
0.0019
E14.5 retina
TTGGTTTTGA
1.8
0.0018
P2.5 retina
AAACTGGAGA
(
3
)
3.5
0.0035
P4.5 retina
AAACTGGAGA
(
3
)
CTGATGAATA
(
2
)
4
0.004
P6.5 retina
AAACTGGAGA
(
3
)
1.7
0.0017
P10.5 crx- retina
AAACTGGAGA
(
3
)
CTGATGAATA
(
2
)
9.3
0.0093
P10.5 crx+ retina
CTGATGAATA
(
2
)
CTTCTCAAAA
(
5
)
GCCTCCGTAA
(
2
)
13.4
0.0134
Adult retinal
AAACTGGAGA
(
3
)
3.7
0.0037
ONL
AAACTGGAGA
(
3
)
CTTCTCAAAA
(
5
)
GCCTCCGTAA
(
2
)
TTGGTTTTGA
11.4
0.0114
