Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.245715	Snap23	synaptosomal-associated protein 23	2	2 61.8 cM	20619
Gene Ontology	intracellular protein transport | membrane | membrane fusion | plasma membrane | post-Golgi transport | protein transport | protein transporter activity | synaptosome | transport vesicle | t-SNARE activity | vacuole organization and biogenesis | vesicle targeting
Human Homolog	SNAP23[synaptosomal-associated protein, 23kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGTGTATG (3) TGTGTGTGTG (2) 29.3 0.0293 Cb medulloblastoma AAAGAAGCAG (3) TGTGTGTGTG (2) 32.4 0.0324 P8 GC+1d culture CTGATTTGTC TGTGTGTATG (3) TGTGTGTGTG (2) TGTTTTGTTC (2) 31.9 0.0319 P8 GC+SHH+1d culture TGTGTGTGTG (2) TGTTTTGTTC (2) 29.3 0.0293 3T3 fibroblasts AAAGAAGCAG (3) CAGGAACATT (4) TGTGTGTGTG (2) TGTTTTGTTC (2) 38.5 0.0385 P1 cortex TGTGTGTGTG (2) 18.2 0.0182 Hypothalamus TGTGTGTATG (3) TGTGTGTGTG (2) 27.2 0.0272 E12.5 retina AAAGAAGCAG (3) TGTGTGTGTG (2) TGTTTTGTTC (2) 48.9 0.0489 E14.5 retina TGTGTGTGTG (2) TGTTTTGTTC (2) 56.5 0.0565 E16.5 retina TGTGTGTATG (3) TGTGTGTGTG (2) TGTTTTGTTC (2) 50.6 0.0506 E18.5 retina TGTGTGTATG (3) TGTGTGTGTG (2) 49.1 0.0491 P0.5 retina TGTGTGTGTG (2) TGTTTTGTTC (2) 23.6 0.0236 P2.5 retina AAAGAAGCAG (3) TGTGTGTGTG (2) 37 0.037 P4.5 retina TGTGTGTGTG (2) TGTTTTGTTC (2) 51.6 0.0516 P6.5 retina CTGATTTGTC TGTGTGTGTG (2) TGTTTTGTTC (2) 50.1 0.0501 P10.5 crx- retina AAAGAAGCAG (3) CAGGAACATT (4) TGTGTGTGTG (2) TGTTTTGTTC (2) 65.1 0.0651 P10.5 crx+ retina TGTGTGTGTG (2) TGTTTTGTTC (2) 48 0.048 Adult retinal CTGATTTGTC TGTGTGTGTG (2) TGTTTTGTTC (2) 57.5 0.0575 ONL TGTGTGTATG (3) TGTGTGTGTG (2) 24.9 0.0249