| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAACCCCAGG (2) GGGTCAAAGG TCTGTCCTCA (2)
| 62 | 0.062 |
| Cb medulloblastoma | CTTGCAATCT GGGTCAAAGG TACGCCAAGC (2)
| 20.7 | 0.0207 |
| P8 GC+1d culture | CTTGCAATCT GGGTCAAAGG GTTGTGGTGG (2)
| 67.3 | 0.0673 |
| P8 GC+SHH+1d culture | CTTGCAATCT GGGTCAAAGG
| 59.7 | 0.0597 |
| 3T3 fibroblasts | GGGTCAAAGG
| 14 | 0.014 |
| E15 cortex | AAGAGAGCAG GGGTCAAAGG
| 34.6 | 0.0346 |
| P1 cortex | GGGTCAAAGG
| 22.7 | 0.0227 |
| Hypothalamus | AAAGACAACA GAAAAAACAT (2) GGGTCAAAGG
| 7.2 | 0.0072 |
| E12.5 retina | GGGTCAAAGG GTTGTGGTGG (2) TAGCCTCCCA
| 28.2 | 0.0282 |
| E14.5 retina | CTTGCAATCT GGGTCAAAGG
| 5.4 | 0.0054 |
| E16.5 retina | AAGAGAGCAG ATTTGTGCAG GAAAAAACAT (2) GGGTCAAAGG TCTGTCCTCA (2)
| 38 | 0.038 |
| E18.5 retina | AAAGACAACA GGGTCAAAGG GTTGTGGTGG (2)
| 41.8 | 0.0418 |
| P0.5 retina | AAAGACAACA ATTTGTGCAG CACAAAAAAT (6) GGGTCAAAGG
| 60.8 | 0.0608 |
| P2.5 retina | AAGAGAGCAG CACAAAAAAT (6) CTTGCAATCT GGGTCAAAGG
| 45.9 | 0.0459 |
| P4.5 retina | ATTTGTGCAG CTTGCAATCT GGGTCAAAGG
| 35.7 | 0.0357 |
| P6.5 retina | ATTTGTGCAG CTTGCAATCT GAAAAAACAT (2) GGGTCAAAGG TACGCCAAGC (2)
| 21.7 | 0.0217 |
| P10.5 crx- retina | ATTTGTGCAG CACAAAAAAT (6) CTTGCAATCT GGGTCAAAGG
| 70.7 | 0.0707 |
| P10.5 crx+ retina | GGGTCAAAGG GTTGTGGTGG (2) TAGCCTCCCA
| 40.3 | 0.0403 |
| Adult retinal | GGGTCAAAGG
| 24.1 | 0.0241 |
| ONL | CACAAAAAAT (6) CTTGCAATCT GAAAAAACAT (2) GGGTCAAAGG TCTGTCCTCA (2)
| 17.2 | 0.0172 |