Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.245894
Rutbc1
RUN and TBC1 domain containing 1
11
97761
Human Homolog
RUTBC1[RUN and TBC1 domain containing 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 35 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GACAGTCACA
TAAGCCAAGG
(
3
)
4.9
0.0049
P8 GC+SHH+1d culture
CCCAGCCCAC (
2
)
CCCAGCTTGG
GACAGTCACA
4.7
0.0047
3T3 fibroblasts
CCCAGCTTGG
GACAGTCACA
7
0.007
E15 cortex
CCCAGCCCAC (
2
)
CCCAGCTTGG
TAAGCCAAGT
24.7
0.0247
P1 cortex
CCCAGCCCAC (
2
)
4.5
0.0045
Hypothalamus
CCCAGCCCAC (
2
)
TAAGCCAAGG
(
3
)
7.2
0.0072
E12.5 retina
GACAGTCACA
TAAGCCAAGT
5.7
0.0057
E14.5 retina
GACAGTCACA
1.8
0.0018
E16.5 retina
CCCAGCCCAC (
2
)
TAAGCCAAGG
(
3
)
5.4
0.0054
E18.5 retina
CCCAGCCCAC (
2
)
GACAGTCACA
3.6
0.0036
P0.5 retina
GACAGTCACA
TAAGCCAAGT
5.9
0.0059
P2.5 retina
CCCAGCCCAC (
2
)
TAAGCCAAGT
3.6
0.0036
P4.5 retina
AAGAGGCAGA (
2
)
2
0.002
P6.5 retina
CCCAGCCCAC (
2
)
GACAGTCACA
TAAGCCAAGG
(
3
)
5.1
0.0051
P10.5 crx- retina
CCCAGCCCAC (
2
)
GACAGTCACA
9.3
0.0093
Adult retinal
CCCAGCCCAC (
2
)
GACAGTCACA
TAAGCCAAGT
13
0.013
ONL
AAGAGGCAGA (
2
)
CCCAGCCCAC (
2
)
5.7
0.0057
