Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.246131	Vps39	vacuolar protein sorting 39 (yeast)	2		269338
Gene Ontology	protein transport | small GTPase regulatory/interacting protein activity | transport
Human Homolog	VPS39[vacuolar protein sorting 39 (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACATACATA GTGTGAAAAA TGAGTCCTGC 8.1 0.0081 Cb medulloblastoma CACATACATA TGAGTCCTGC 4.6 0.0046 P8 GC+1d culture GTGTGAAAAA TGAGTCCTGC 9.1 0.0091 P8 GC+SHH+1d culture CACATACATA GAGGGCACTC (2) TGAGTCCTGC 9.4 0.0094 3T3 fibroblasts TGAGTCCTGC 3.5 0.0035 E15 cortex TGAGTCCTGC 4.9 0.0049 P1 cortex AGAAAGCTCT TGAGTCCTGC 13.6 0.0136 Hypothalamus GTGTGAAAAA TGAGTCCTGC 10.9 0.0109 E12.5 retina CACATACATA GAGGGCACTC (2) GTGTGAAAAA TGAGTCCTGC 15.1 0.0151 E14.5 retina CACATACATA GTGTGAAAAA 3.6 0.0036 E16.5 retina TGAGTCCTGC 1.8 0.0018 E18.5 retina AACAAGCTCT AGAAAGCTCT GTGTGAAAAA TGAGTCCTGC 9 0.009 P0.5 retina CACATACATA TGAGTCCTGC 7.9 0.0079 P2.5 retina CACATACATA TGAGTCCTGC 7.1 0.0071 P4.5 retina TGAGTCCTGC 4 0.004 P6.5 retina AACAAGCTCT TGAGTCCTGC 6.7 0.0067 P10.5 crx- retina AACAAGCTCT TGAGTCCTGC 11.2 0.0112 P10.5 crx+ retina CACATACATA TGAGTCCTGC 7.7 0.0077 Adult retinal AACAAGCTCT TGAGTCCTGC 14.8 0.0148 ONL AACAAGCTCT GAGGGCACTC (2) TGAGTCCTGC 7.6 0.0076