Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24632	Gtf2f1	general transcription factor IIF, polypeptide 1	17		98053
Gene Ontology	DNA binding | general RNA polymerase II transcription factor activity | nucleus | protein binding | regulation of transcription, DNA-dependent | transcription coactivator activity | transcription factor TFIIF complex | transcription from Pol II promoter | transcription initiation from Pol II promoter | translation initiation factor activity
Human Homolog	GTF2F1[general transcription factor IIF, polypeptide 1, 74kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCACAAAGG TATTTCAAAA (3) 6.6 0.0066 Cb medulloblastoma TATTTCAAAA (3) TCTTGGAAGT 13.8 0.0138 P8 GC+1d culture ACCACAAAGG GGCTTGCGGG TATTTCAAAA (3) 8 0.008 P8 GC+SHH+1d culture GGCTTGCGGG TATTTCAAAA (3) 3.5 0.0035 3T3 fibroblasts ACCACAAAGG ACCTGGAGGA (2) GGCTTGCGGG 24.5 0.0245 E15 cortex ACCTGGAGGA (2) 4.9 0.0049 P1 cortex ACCACAAAGG 9.1 0.0091 Hypothalamus AAGAGTGCAG (2) TATTTCAAAA (3) 5.4 0.0054 E12.5 retina ACCACAAAGG 5.6 0.0056 E14.5 retina TATTTCAAAA (3) TCTTGGAAGT 7.3 0.0073 E16.5 retina AAGAGTGCAG (2) GGCTTGCGGG TATTTCAAAA (3) 5.4 0.0054 E18.5 retina AAGAGTGCAG (2) TATTTCAAAA (3) 3.6 0.0036 P0.5 retina ACCACAAAGG 5.9 0.0059 P2.5 retina AAGAGTGCAG (2) ACCACAAAGG ACCTGGAGGA (2) TATTTCAAAA (3) TCTTGGAAGT 14.1 0.0141 P4.5 retina ACCACAAAGG TATTTCAAAA (3) TCTTGGAAGT 9.9 0.0099 P6.5 retina ACCACAAAGG TATTTCAAAA (3) 8.4 0.0084 P10.5 crx- retina ACCACAAAGG GGCTTGCGGG 16.8 0.0168 P10.5 crx+ retina ACCACAAAGG TATTTCAAAA (3) TCTTGGAAGT 9.5 0.0095 Adult retinal ACCACAAAGG TATTTCAAAA (3) TCTTGGAAGT 9.4 0.0094 ONL ACCACAAAGG TATTTCAAAA (3) 3.8 0.0038