Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.246497	Igh-VJ558	immunoglobulin heavy chain (J558 family)	12	12 59.0 cM	16061
Human Homolog	MGC27165[hypothetical protein MGC27165]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGACCCTGG 8.2 0.0082 Cb medulloblastoma CAGGTCAGAC (3) GGCTGCCTGG (2) GTGACCCTGG (3) 6.9 0.0069 P8 GC+1d culture GGCTGCCTGG (2) GGGACCCTGG GTGACCCTGG (3) GTGGACCCTG (3) 5.6 0.0056 P8 GC+SHH+1d culture CAGGTCAGAC (3) GGGACCCTGG GTGACCCTGG (3) 10.5 0.0105 3T3 fibroblasts CAGCTCAGTA (2) GGGACCCTGG 21 0.021 E15 cortex GGCTGCCTGG (2) GGGACCCTGG 14.8 0.0148 P1 cortex GTGGACCCTG (3) 4.5 0.0045 Hypothalamus CAGCTCAGTA (2) CAGGTCAGAC (3) GGCTGCCTGG (2) GTGGACCCTG (3) 9 0.009 E12.5 retina GGGACCCTGG 3.8 0.0038 E14.5 retina GGGACCCTGG 3.6 0.0036 E16.5 retina GGGACCCTGG 1.8 0.0018 E18.5 retina GGGACCCTGG GTGACCCTGG (3) GTGGACCCTG (3) 5.4 0.0054 P0.5 retina GGCTGCCTGG (2) GGGACCCTGG GTGGACCCTG (3) 9.8 0.0098 P2.5 retina CAGGTCAGAC (3) GTGACCCTGG (3) 3.6 0.0036 P4.5 retina GGGACCCTGG 2 0.002 P10.5 crx- retina CAGGTCAGAC (3) 1.9 0.0019 P10.5 crx+ retina GGCTGCCTGG (2) 1.9 0.0019 Adult retinal GTGGACCCTG (3) 3.7 0.0037 ONL GGCTGCCTGG (2) GTGACCCTGG (3) 3.8 0.0038