| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TGCAGCTTTC (4)
| 4.9 | 0.0049 |
| Cb medulloblastoma | GGCCAGACTG TCCCCTGGAA
| 4.6 | 0.0046 |
| P8 GC+1d culture | GTGCACTTTC TATGGCATCT TGCAGCTTTC (4)
| 5.6 | 0.0056 |
| P8 GC+SHH+1d culture | GTGACCACAG (4) TATTAATTAT (2) TGCAGCTTTC (4)
| 7.1 | 0.0071 |
| 3T3 fibroblasts | TATGGCATCT TGCAGCTTTC (4)
| 7 | 0.007 |
| E15 cortex | CAACACCCAA (3) GTGGAAAGAG TGCAGCTTTC (4)
| 24.6 | 0.0246 |
| Hypothalamus | GTGGAAAGAG
| 1.8 | 0.0018 |
| E12.5 retina | CAACACCCAA (3) TAGACAGGTG (3) TGCAGCTTTC (4)
| 5.7 | 0.0057 |
| E14.5 retina | CACACCACAC TATGGCATCT TGCAGCTTTC (4)
| 14.5 | 0.0145 |
| E16.5 retina | GTGACCACAG (4) TATGGCATCT TGCAGCTTTC (4)
| 10.8 | 0.0108 |
| E18.5 retina | GTGGAAAGAG TAGACAGGTG (3) TATTAATTAT (2) TCCCCTGGAA TGCAGCTTTC (4)
| 12.6 | 0.0126 |
| P0.5 retina | CAACACCCAA (3) GGCCAGACTG TGCAGCTTTC (4)
| 15.8 | 0.0158 |
| P2.5 retina | CACACCACAC GTGCACTTTC TATGGCATCT TATTAATTAT (2) TGCAGCTTTC (4)
| 12.5 | 0.0125 |
| P4.5 retina | TAGACAGGTG (3) TCCCCTGGAA
| 6 | 0.006 |
| P6.5 retina | CACACCACAC TCCCCTGGAA TGCAGCTTTC (4)
| 10.1 | 0.0101 |
| P10.5 crx- retina | TAGACAGGTG (3) TCCCCTGGAA TGCAGCTTTC (4)
| 11.2 | 0.0112 |
| P10.5 crx+ retina | GTGACCACAG (4) TGCAGCTTTC (4) TTTTAAAAAG (5)
| 7.6 | 0.0076 |
| Adult retinal | GGCCAGACTG
| 1.9 | 0.0019 |
| ONL | TTTTAAAAAG (5)
| 1.9 | 0.0019 |