Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.247352	Slc6a6	solute carrier family 6 (neurotransmitter transporter, taurine), member 6	6	6 D1 (6 38.2 cM)	21366
Mm.247352	4930517G19Rik	RIKEN cDNA 4930517G19 gene	6		74727
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATGCCTGA (2) GAAATCAATA (2) TATTTTGTGG (2) TGACAGGCGC (2) TTGCTTTGTT (3) 9.7 0.0097 Cb medulloblastoma AAATGCCTGA (2) ATCGTACTGT TATTTTGTGG (2) TGACAGGCGC (2) 18.4 0.0184 P8 GC+1d culture ATCGTACTGT GTTTGTTTTG TATTTTGTGG (2) TGACAGGCGC (2) TTCCCTGAAG (2) 6.7 0.0067 P8 GC+SHH+1d culture AAATGCCTGA (2) ATCGTACTGT CAGTTTGTAA TTCCCTGAAG (2) 9.3 0.0093 3T3 fibroblasts TTCCCTGAAG (2) 7 0.007 E15 cortex AAATGCCTGA (2) ATCGTACTGT TTGCTTTGTT (3) 14.7 0.0147 P1 cortex ATCGTACTGT TATTTTGTGG (2) 22.7 0.0227 Hypothalamus AAATGCCTGA (2) 1.8 0.0018 E12.5 retina GAAATCAATA (2) GTTTGTTTTG TATTTTGTGG (2) 13.2 0.0132 E14.5 retina AAATGCCTGA (2) TTCCCTGAAG (2) 3.6 0.0036 E16.5 retina GTTTGTTTTG TTGCTTTGTT (3) 3.6 0.0036 E18.5 retina AAATGCCTGA (2) 1.8 0.0018 P0.5 retina GTTTGTTTTG TGACAGGCGC (2) TTCCCTGAAG (2) TTGCTTTGTT (3) 9.9 0.0099 P2.5 retina AAATGCCTGA (2) ATCGTACTGT GAAATCAATA (2) TGACAGGCGC (2) TTCCCTGAAG (2) 10.7 0.0107 P4.5 retina AAATGCCTGA (2) ATCGTACTGT GAAATCAATA (2) GCACAAGAGC (2) TGACAGGCGC (2) 10 0.01 P6.5 retina AAATGCCTGA (2) GCACAAGAGC (2) TGACAGGCGC (2) TTCCCTGAAG (2) TTGCTTTGTT (3) 15.1 0.0151 P10.5 crx- retina GTTTGTTTTG TTCCCTGAAG (2) TTGCTTTGTT (3) 7.5 0.0075 P10.5 crx+ retina AAATGCCTGA (2) ATCGTACTGT GAAATCAATA (2) TATTTTGTGG (2) TGACAGGCGC (2) TTCCCTGAAG (2) 19.1 0.0191 Adult retinal GAAATCAATA (2) GCACAAGAGC (2) TATACATTGG (2) TATTTTGTGG (2) TGACAGGCGC (2) TTCCCTGAAG (2) 70.5 0.0705 ONL ATCGTACTGT GCACAAGAGC (2) TATACATTGG (2) TATTTTGTGG (2) TGACAGGCGC (2) TTCCCTGAAG (2) 68.9 0.0689