| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGAAAATAG AATGGAAATC TAGAGTTTGA
| 50.5 | 0.0505 |
| Cb medulloblastoma | AAGAAAATAG AATGGAAATC CACACACGCA (2) TAGAGTTTGA
| 30 | 0.03 |
| P8 GC+1d culture | AAGAAAACAG (3) AAGAAAATAG AATGGAAATC CAAATGAGGC CACACACGCA (2) TACACAACAC TAGAGTTTGA
| 53.7 | 0.0537 |
| P8 GC+SHH+1d culture | AAGAAAATAG AATGGAAATC TACACAACAC TAGAGTTTGA TGTCACATAA
| 52.7 | 0.0527 |
| 3T3 fibroblasts | AAGAAAATAG
| 17.5 | 0.0175 |
| E15 cortex | AAGAAAATAG TAGAGTTTGA
| 19.7 | 0.0197 |
| P1 cortex | AAGAAAATAG CAAATGAGGC
| 68.2 | 0.0682 |
| Hypothalamus | AAGAAAATAG CAAATGAGGC CACACACGCA (2) TAGAGTTTGA TGTCACATAA
| 36.2 | 0.0362 |
| E12.5 retina | AAGAAAATAG AATGGAAATC
| 37.5 | 0.0375 |
| E14.5 retina | AAGAAAATAG AATGGAAATC CAAATGAGGC CACACACGCA (2) TGTCACATAA
| 41.8 | 0.0418 |
| E16.5 retina | AAGAAAATAG
| 38 | 0.038 |
| E18.5 retina | AAGAAAATAG AATGGAAATC
| 29.1 | 0.0291 |
| P0.5 retina | AAGAAAATAG TAGAGTTTGA
| 35.4 | 0.0354 |
| P2.5 retina | AAGAAAATAG CAAATGAGGC TAGAGTTTGA
| 37 | 0.037 |
| P4.5 retina | AAGAAAATAG CAAATGAGGC CACACACGCA (2) TAGAGTTTGA
| 41.7 | 0.0417 |
| P6.5 retina | AAGAAAACAG (3) AAGAAAATAG AATGGAAATC CACACACGCA (2) TACACAACAC TAGAGTTTGA
| 25 | 0.025 |
| P10.5 crx- retina | AAGAAAATAG AATGGAAATC CAAATGAGGC CACACACGCA (2) TACACAACAC TAGAGTTTGA TGTCACATAA
| 154.4 | 0.1544 |
| P10.5 crx+ retina | AAGAAAATAG CAAATGAGGC CACACACGCA (2) TAGAGTTTGA
| 32.6 | 0.0326 |
| Adult retinal | AAGAAAACAG (3) AAGAAAATAG CAAATGAGGC TACACAACAC
| 16.8 | 0.0168 |
| ONL | AAGAAAATAG CAAATGAGGC CACACACGCA (2)
| 19.1 | 0.0191 |