Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2475	Gcdh	glutaryl-Coenzyme A dehydrogenase	8	8 38.6 cM	270076
Gene Ontology	acyl-CoA dehydrogenase activity | electron transport | glutaryl-CoA dehydrogenase activity | mitochondrion | oxidoreductase activity | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	GCDH[glutaryl-Coenzyme A dehydrogenase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCTGATCCT (2) GACAATAAAA GACAGTGTGG (4) TTGGAAAAAA (3) 9.7 0.0097 Cb medulloblastoma CTCTGATCCT (2) GACAATAAAA 4.6 0.0046 P8 GC+1d culture GACAATAAAA GACAGCGTGG (2) GACAGTGTGG (4) TACAAGGCCT TTGGAAAAAA (3) 7.9 0.0079 P8 GC+SHH+1d culture CTGATATTGT (2) GACAATAAAA GACAGTGTGG (4) TTGGAAAAAA (3) 8.2 0.0082 3T3 fibroblasts TACAAGGCCT 3.5 0.0035 E15 cortex GACAATAAAA 4.9 0.0049 P1 cortex CTCTGATCCT (2) GACAATAAAA TTGGAAAAAA (3) 13.5 0.0135 Hypothalamus GACAGTGTGG (4) 1.8 0.0018 E12.5 retina CTGATATTGT (2) GACAGTGTGG (4) TTGGAAAAAA (3) 7.6 0.0076 E14.5 retina GACAATAAAA GACAGTGTGG (4) 7.3 0.0073 E16.5 retina CTGATATTGT (2) GACAATAAAA 7.2 0.0072 E18.5 retina CTCTGATCCT (2) GACAATAAAA GACAGTGTGG (4) TTGGAAAAAA (3) 16.3 0.0163 P0.5 retina CTGATATTGT (2) GACAATAAAA GACAGCGTGG (2) GACAGTGTGG (4) 9.9 0.0099 P2.5 retina CTGATATTGT (2) GACAATAAAA TTGGAAAAAA (3) 14 0.014 P4.5 retina GACAGTGTGG (4) 5.9 0.0059 P6.5 retina GACAATAAAA GACAGTGTGG (4) TTGGAAAAAA (3) 11.7 0.0117 P10.5 crx- retina GACAATAAAA GACAGTGTGG (4) 7.5 0.0075 P10.5 crx+ retina CTGATATTGT (2) GACAATAAAA GACAGTGTGG (4) TACAAGGCCT 15.3 0.0153 Adult retinal GACAGCGTGG (2) GACAGTGTGG (4) TTGGAAAAAA (3) 5.7 0.0057 ONL TTGGAAAAAA (3) 1.9 0.0019