Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.247510	Aldh6a1	aldehyde dehydrogenase family 6, subfamily A1	12		104776
Gene Ontology	metabolism | methylmalonate-semialdehyde dehydrogenase (acylating) activity | mitochondrion | mitochondrion | oxidoreductase activity
Human Homolog	ALDH6A1[aldehyde dehydrogenase 6 family, member A1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CATTTTGTTT (2) TGTGGACAGT TTAGTGTGGG 6.5 0.0065 Cb medulloblastoma CATTTTGTTT (2) TTCTTGGTGT 4.6 0.0046 P8 GC+1d culture CATTTTGTTT (2) TTAGTGTGGG TTCTTGGTGT 16 0.016 P8 GC+SHH+1d culture CATTTTGTTT (2) TGTGGACAGT TTAGTGTGGG TTCTTGGTGT 18.7 0.0187 3T3 fibroblasts TTAGTGTGGG 3.5 0.0035 E15 cortex TGACAACCAT (2) 4.9 0.0049 P1 cortex TGACAACCAT (2) TTAGTGTGGG 13.6 0.0136 Hypothalamus CACAACAGGC TGACAACCAT (2) TGTGGACAGT 7.2 0.0072 E12.5 retina CACAACAGGC CATTTTGTTT (2) TGTGGACAGT 11.3 0.0113 E14.5 retina CACAACAGGC CATTTTGTTT (2) TTCTTGGTGT 25.5 0.0255 E16.5 retina CACAACAGGC CATTTTGTTT (2) TGACAACCAT (2) TTAGTGTGGG TTCTTGGTGT 14.4 0.0144 E18.5 retina CACAACAGGC CATTTTGTTT (2) TGTGGACAGT TTAGTGTGGG 21.9 0.0219 P0.5 retina CACAACAGGC CATTTTGTTT (2) TGTGGACAGT TTAGTGTGGG 23.5 0.0235 P2.5 retina CATTTTGTTT (2) TTAGTGTGGG 19.4 0.0194 P4.5 retina CATTTTGTTT (2) TTAGTGTGGG 17.9 0.0179 P6.5 retina CATTTTGTTT (2) TTAGTGTGGG TTCTTGGTGT 10.1 0.0101 P10.5 crx- retina CATTTTGTTT (2) TGACAACCAT (2) TTAGTGTGGG TTCTTGGTGT 9.4 0.0094 P10.5 crx+ retina CATTTTGTTT (2) TGTGGACAGT TTAGTGTGGG 17.3 0.0173 Adult retinal CATTTTGTTT (2) TGACAACCAT (2) TGTGGACAGT TTAGTGTGGG 13.1 0.0131 ONL CATTTTGTTT (2) TGACAACCAT (2) TTAGTGTGGG 5.7 0.0057