Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.247542	Prdx4	peroxiredoxin 4	X	X 67.7 cM	53381
Gene Ontology	antioxidant activity | biological_process unknown | extracellular space | mitochondrion | oxidoreductase activity | peroxidase activity
Human Homolog	PRDX4[peroxiredoxin 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTACCACTTC CTTGTCAGTG GAGAAAGTCT (2) GAGAACTTTG (2) GAGAAGTCTG GAGAATTTTC (2) 71.8 0.0718 Cb medulloblastoma GAGAACTTTG (2) GAGAAGTCTG GAGAATTTTC (2) 13.8 0.0138 P8 GC+1d culture GAGAAAGTCT (2) GAGAACTTTG (2) GAGAAGTCTG GAGAATTTTC (2) 93.6 0.0936 P8 GC+SHH+1d culture CCTTTAGTTT (3) CTACCACTTC GAGAAAGTCT (2) GAGAACTTTG (2) GAGAAGTCTG 91.3 0.0913 3T3 fibroblasts GAGAAAGTCT (2) GAGAAGTCTG 17.5 0.0175 E15 cortex GAGAAAGTCT (2) GAGAACTTTG (2) GAGAATTTTC (2) 69.2 0.0692 P1 cortex GAGAAAGTCT (2) GAGAACTTTG (2) 18.1 0.0181 Hypothalamus GAGAAAGTCT (2) GAGAACTTTG (2) GAGAAGTCTG GAGAATTTTC (2) 25.3 0.0253 E12.5 retina CTACCACTTC GAGAAAGTCT (2) GAGAAGTCTG 73.2 0.0732 E14.5 retina CTACCACTTC GAGAAAGTCT (2) GAGAAGTCTG 52.8 0.0528 E16.5 retina CTACCACTTC GAGAAAGTCT (2) GAGAAGTCTG GAGGAGTCTG (3) 85.1 0.0851 E18.5 retina GAGAAAGTCT (2) GAGAAGTCTG GAGAATTTTC (2) 72.8 0.0728 P0.5 retina GAGAAAGTCT (2) GAGAAGTCTG GAGAAGTTTG (2) GAGAATTTTC (2) 57 0.057 P2.5 retina CCTTTAGTTT (3) GAGAAAGTCT (2) GAGAAGTCTG 63.4 0.0634 P4.5 retina CCTTTAGTTT (3) CTTGTCAGTG GAGAAAGTCT (2) GAGAACTTTG (2) GAGAAGTCTG GAGGAGTCTG (3) 69.5 0.0695 P6.5 retina GAGAAAGTCT (2) GAGAAGTCTG GAGAATTTTC (2) 28.4 0.0284 P10.5 crx- retina CCTTTAGTTT (3) GAGAAAGTCT (2) GAGAACTTTG (2) GAGAAGTCTG 18.7 0.0187 P10.5 crx+ retina GAGAAAGTCT (2) GAGAAGTCTG GAGAATTTTC (2) 15.3 0.0153 Adult retinal CTTGTCAGTG GAGAAGTCTG GAGAAGTTTG (2) GAGAATTTTC (2) 7.6 0.0076 ONL GAGAAAGTCT (2) GAGGAGTCTG (3) 5.7 0.0057