| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCTTTAATCC (3)
| 52.2 | 0.0522 |
| Cb medulloblastoma | CCTTTAATCC (3) TCCCACAGGC (3)
| 43.9 | 0.0439 |
| P8 GC+1d culture | CCTTTAATCC (3) GAAGCCCAGA (2) TCCCACAGGC (3) TCTTTAAAAA
| 36.5 | 0.0365 |
| P8 GC+SHH+1d culture | AGACCAGCAG CAGGAAACTC (2) CCTTTAATCC (3) GAAGCCCAGA (2) TCCCACAGGC (3) TCTTTAAAAA
| 32.9 | 0.0329 |
| 3T3 fibroblasts | ATTCCGTTAG CCTTTAATCC (3)
| 73.6 | 0.0736 |
| E15 cortex | CCTTTAATCC (3)
| 54.4 | 0.0544 |
| P1 cortex | ATTCCGTTAG CCTTTAATCC (3)
| 159 | 0.159 |
| Hypothalamus | CCTTTAATCC (3)
| 19.9 | 0.0199 |
| E12.5 retina | CCTTTAATCC (3) GAAGCCCAGA (2) TCTTTAAAAA
| 78.9 | 0.0789 |
| E14.5 retina | CAGGAAACTC (2) CCTTTAATCC (3) TCCCACAGGC (3) TCCCCCCTGC TCTTTAAAAA
| 129.3 | 0.1293 |
| E16.5 retina | ATTCCGTTAG CCTTTAATCC (3) TCCCACAGGC (3) TCTTTAAAAA
| 76 | 0.076 |
| E18.5 retina | CCTTTAATCC (3)
| 23.6 | 0.0236 |
| P0.5 retina | ATTCCGTTAG CCTTTAATCC (3) GAAGCCCAGA (2) TCCCACAGGC (3) TCCCCCCTGC
| 88.2 | 0.0882 |
| P2.5 retina | AGACCAGCAG ATTCCGTTAG CAGGAAACTC (2) CCTTTAATCC (3) TCTTTAAAAA
| 81.1 | 0.0811 |
| P4.5 retina | CAGGAAACTC (2) CCTTTAATCC (3) TCTTTAAAAA
| 47.6 | 0.0476 |
| P6.5 retina | ATTCCGTTAG CCTTTAATCC (3)
| 71.7 | 0.0717 |
| P10.5 crx- retina | ATTCCGTTAG CCTTTAATCC (3)
| 70.6 | 0.0706 |
| P10.5 crx+ retina | AGACCAGCAG CCTTTAATCC (3)
| 40.3 | 0.0403 |
| Adult retinal | ATTCCGTTAG CAGGAAACTC (2) CCTTTAATCC (3)
| 135.2 | 0.1352 |
| ONL | CCTTTAATCC (3) TCTTTAAAAA
| 86.2 | 0.0862 |