| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTGGGAAGCT (2) TCTATAATCC
| 27.8 | 0.0278 |
| Cb medulloblastoma | CAGGTGCTGG CTGGGAAGCT (2) GGCAGGGAGG TCTATAATCC
| 11.5 | 0.0115 |
| P8 GC+1d culture | CGTGGTGTGA (2) TCTATAATCC
| 15.9 | 0.0159 |
| P8 GC+SHH+1d culture | CGTGGTGTGA (2) CTGGGAAGCT (2) TCTATAATCC
| 18.7 | 0.0187 |
| 3T3 fibroblasts | CGTGGTGTGA (2) CTGGGAAGCT (2)
| 7 | 0.007 |
| E15 cortex | CGTGGTGTGA (2) GTGGCCAACG (2)
| 9.8 | 0.0098 |
| Hypothalamus | CTGGGAAGCT (2) GGCAGGGAGG
| 5.4 | 0.0054 |
| E12.5 retina | CTGGGAAGCT (2) GGCAGGGAGG
| 3.8 | 0.0038 |
| E14.5 retina | CAGAACAGCT CAGGTGCTGG GTGGCCAACG (2)
| 5.4 | 0.0054 |
| E16.5 retina | CAGGTGCTGG CGTGGTGTGA (2) GTGGCCAACG (2) TCTATAATCC
| 7.2 | 0.0072 |
| E18.5 retina | GGCAGGGAGG
| 1.8 | 0.0018 |
| P0.5 retina | CTGGGAAGCT (2) TCTATAATCC
| 4 | 0.004 |
| P2.5 retina | CTGGGAAGCT (2) GGCAGGGAGG
| 7.1 | 0.0071 |
| P4.5 retina | CAGAACAGCT CTGGGAAGCT (2) GGCAGGGAGG
| 11.9 | 0.0119 |
| P10.5 crx- retina | TCTATAATCC
| 1.9 | 0.0019 |
| Adult retinal | GGCAGGGAGG
| 1.9 | 0.0019 |
| ONL | CAGAACAGCT CTGGGAAGCT (2) TCTATAATCC
| 5.7 | 0.0057 |