Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24790	Ankhd1	ankyrin repeat and KH domain containing 1	18		108857
Gene Ontology	DNA binding | receptor activity | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	ANKHD1[ankyrin repeat and KH domain containing 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGAGTCTGT GAAAAAAAAA (2) TAAAAGTTGT (3) TGGTTGCTGG 130.5 0.1305 Cb medulloblastoma ATGAGTCTGT GAAAAAAAAA (2) TAAAAGTTGT (3) TGGTTGCTGG 300.5 0.3005 P8 GC+1d culture ATGAGTCTGT GAAAAAAAAA (2) TAAAAGTTGT (3) TGGTTGCTGG 111.9 0.1119 P8 GC+SHH+1d culture ATGAGTCTGT GAAAAAAAAA (2) TAAAAGTTGT (3) TGGTTGCTGG 185 0.185 3T3 fibroblasts TGGTTGCTGG 220.8 0.2208 E15 cortex GAAAAAAAAA (2) TGGTTGCTGG 331.5 0.3315 P1 cortex ATGAGTCTGT GAAAAAAAAA (2) TGGTTGCTGG 154.6 0.1546 Hypothalamus AGATACATAG ATGAGTCTGT GAAAAAAAAA (2) TAAAAGTTGT (3) TGGTTGCTGG 461.9 0.4619 E12.5 retina GAAAAAAAAA (2) TAAAAGTTGT (3) TGGTTGCTGG 215.9 0.2159 E14.5 retina ATGAGTCTGT GAAAAAAAAA (2) TAAAAGTTGT (3) TGGTTGCTGG 976.5 0.9765 E16.5 retina ATGAGTCTGT GAAAAAAAAA (2) TAAAAGTTGT (3) TGGTTGCTGG 813.2 0.8132 E18.5 retina ATGAGTCTGT GAAAAAAAAA (2) TAAAAGTTGT (3) TGGTTGCTGG 338.4 0.3384 P0.5 retina ATGAGTCTGT GAAAAAAAAA (2) TGGTTGCTGG 231.6 0.2316 P2.5 retina ATGAGTCTGT GAAAAAAAAA (2) TAAAAGTTGT (3) TGGTTGCTGG 272.7 0.2727 P4.5 retina AGATACATAG ATGAGTCTGT GAAAAAAAAA (2) TAAAAGTTGT (3) TGGTTGCTGG 225.9 0.2259 P6.5 retina ATGAGTCTGT GAAAAAAAAA (2) TAAAAGTTGT (3) TGGTTGCTGG 210 0.21 P10.5 crx- retina AGATACATAG ATGAGTCTGT GAAAAAAAAA (2) TAAAAGTTGT (3) TGGTTGCTGG 315.8 0.3158 P10.5 crx+ retina AGATACATAG ATGAGTCTGT GAAAAAAAAA (2) TAAAAGTTGT (3) TGGTTGCTGG 173 0.173 Adult retinal ATGAGTCTGT GAAAAAAAAA (2) TAAAAGTTGT (3) TGGTTGCTGG 253.8 0.2538 ONL ATGAGTCTGT GAAAAAAAAA (2) TGGTTGCTGG 442.5 0.4425