| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATCTCAAACC (3) GCTGCCTTAG (2) TAGACCAGGC
| 18 | 0.018 |
| Cb medulloblastoma | ATCTCAAACC (3) CCTGTATTCC (3)
| 4.6 | 0.0046 |
| P8 GC+1d culture | ATCTCAAACC (3) GCCGCCCTGC TAGACCAGGC
| 14.8 | 0.0148 |
| P8 GC+SHH+1d culture | ATCTCAAACC (3) GCCGCCCTGC TAGACCAGGC TTCCTTCTTC
| 14.1 | 0.0141 |
| 3T3 fibroblasts | GCCGCCCTGC
| 3.5 | 0.0035 |
| E15 cortex | TAGACCAGGC
| 4.9 | 0.0049 |
| P1 cortex | ATCTCAAACC (3) CCTGTATTCC (3) GCTGCCTTAG (2)
| 18.1 | 0.0181 |
| Hypothalamus | ATCTCAAACC (3) CCTGTATTCC (3) TAGACCAGGC
| 25.4 | 0.0254 |
| E12.5 retina | ATCTCAAACC (3) TAGACCAGGC
| 11.3 | 0.0113 |
| E14.5 retina | ATCTCAAACC (3) CCTGTATTCC (3) TAGACCAGGC TTCCTTCTTC
| 20 | 0.02 |
| E16.5 retina | ATCTCAAACC (3) TAGACCAGGC TTCCTTCTTC
| 25.3 | 0.0253 |
| E18.5 retina | ATCTCAAACC (3) TAGACCAGGC TTCCTTCTTC
| 29.1 | 0.0291 |
| P0.5 retina | ATCTCAAACC (3) GCTGCCTTAG (2) TAGACCAGGC
| 11.8 | 0.0118 |
| P2.5 retina | ATCTCAAACC (3) GCTGCCTTAG (2) TAGACCAGGC
| 19.4 | 0.0194 |
| P4.5 retina | ATCTCAAACC (3) TAGACCAGGC
| 23.8 | 0.0238 |
| P6.5 retina | ATCTCAAACC (3) CCTGTATTCC (3) TAGACCAGGC
| 26.7 | 0.0267 |
| P10.5 crx- retina | ATCTCAAACC (3) CCTGTATTCC (3) GCTGCCTTAG (2) TAGACCAGGC
| 7.6 | 0.0076 |
| P10.5 crx+ retina | ATCTCAAACC (3) TAGACCAGGC
| 11.5 | 0.0115 |
| Adult retinal | TAGACCAGGC
| 5.6 | 0.0056 |
| ONL | TAGACCAGGC
| 7.7 | 0.0077 |