Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.248687
6330407J23Rik
RIKEN cDNA 6330407J23 gene
10
10 A4
67412
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 11 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 31 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTAGACAAAA
(
2
)
3.3
0.0033
Cb medulloblastoma
TTAGACAAAA
(
2
)
2.3
0.0023
P8 GC+1d culture
CAGCGCTACG
TTAGACAAAA
(
2
)
6.9
0.0069
P8 GC+SHH+1d culture
AAGGAAGCTG (
3
)
AATTAGAAAA
(
2
)
CAGCGCTACG
TTAGACAAAA
(
2
)
9.4
0.0094
3T3 fibroblasts
AAGGAAGCTG (
3
)
7
0.007
E15 cortex
AAGGAAGCTG (
3
)
CAGCGCTACG
19.7
0.0197
P1 cortex
AAGGAAGCTG (
3
)
AATTTGAAAA
(
2
)
9
0.009
Hypothalamus
AAGGAAGCTG (
3
)
CAGCGCTACG
5.4
0.0054
E14.5 retina
AATTTGAAAA
(
2
)
CAGCGCTACG
TTAGACAAAA
(
2
)
7.2
0.0072
E16.5 retina
AAGGAAGCTG (
3
)
AATTAGAAAA
(
2
)
TTAGACAAAA
(
2
)
7.2
0.0072
E18.5 retina
TTAGACAAAA
(
2
)
5.5
0.0055
P0.5 retina
TTAGACAAAA
(
2
)
2
0.002
P2.5 retina
AAGGAAGCTG (
3
)
AATTAGAAAA
(
2
)
TTAGACAAAA
(
2
)
5.4
0.0054
P4.5 retina
AATTAGAAAA
(
2
)
TTAGACAAAA
(
2
)
13.9
0.0139
P6.5 retina
AATTAGAAAA
(
2
)
3.3
0.0033
P10.5 crx- retina
TTAGACAAAA
(
2
)
5.6
0.0056
ONL
TTAGACAAAA
(
2
)
1.9
0.0019
