| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAGAAAAA (3) AAGTTGAATT ATGAGAATTT GAGGCCCCTT (3) TTTGGCTGTT
| 8 | 0.008 |
| Cb medulloblastoma | AAAAGAAAAA (3)
| 11.6 | 0.0116 |
| P8 GC+1d culture | AAAAGAAAAA (3) GCAGGTATCA
| 2.2 | 0.0022 |
| P8 GC+SHH+1d culture | AAAAGAAAAA (3) AAGTTGAATT AGACATAAAG (3) ATGAGAATTT GCAGGTATCA
| 11.7 | 0.0117 |
| 3T3 fibroblasts | GCAGGTATCA
| 3.5 | 0.0035 |
| P1 cortex | ATGAGAATTT
| 9.1 | 0.0091 |
| Hypothalamus | TTTGGCTGTT
| 1.8 | 0.0018 |
| E12.5 retina | AAGTTGAATT AGACATAAAG (3) GCAGGTATCA
| 5.7 | 0.0057 |
| E14.5 retina | ATGAGAATTT GCAGGTATCA
| 5.4 | 0.0054 |
| E16.5 retina | AAGTTGAATT ATGAGAATTT GCAGGTATCA
| 16.2 | 0.0162 |
| E18.5 retina | AAAAGAAAAA (3) AAGTTGAATT AGACATAAAG (3) GCAGGTATCA
| 16.4 | 0.0164 |
| P0.5 retina | AGACATAAAG (3)
| 2 | 0.002 |
| P2.5 retina | AAAAGAAAAA (3) GAGGCCCCTT (3) GCAGGTATCA TTTGGCTGTT
| 12.4 | 0.0124 |
| P4.5 retina | AAAAGAAAAA (3) GCAGGTATCA
| 11.9 | 0.0119 |
| P6.5 retina | ATGAGAATTT
| 3.3 | 0.0033 |
| P10.5 crx- retina | AAAAGAAAAA (3) ATGAGAATTT GCAGGTATCA
| 7.5 | 0.0075 |
| P10.5 crx+ retina | AAAAGAAAAA (3) ATGAGAATTT GAGGCCCCTT (3) GCAGGTATCA
| 19.2 | 0.0192 |
| Adult retinal | AAAAGAAAAA (3) AAGTTGAATT ATGAGAATTT GAGGCCCCTT (3) GCAGGTATCA
| 13.1 | 0.0131 |
| ONL | AAAAGAAAAA (3) ATGAGAATTT GCAGGTATCA
| 19.1 | 0.0191 |