| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCTCCCACCC (2)
| 4.9 | 0.0049 |
| Cb medulloblastoma | CCTCCACCCA CCTCCCACCC (2)
| 9.2 | 0.0092 |
| P8 GC+1d culture | CCACACCTAC CCTCCCACCC (2) TGCACACCCT
| 10.3 | 0.0103 |
| P8 GC+SHH+1d culture | CCACACCTAC TGCACACCCT
| 2.4 | 0.0024 |
| 3T3 fibroblasts | CCTCCACCCA CCTCCCACCC (2)
| 10.5 | 0.0105 |
| E15 cortex | CCTCCCACCC (2) GCTCCACCTG
| 9.8 | 0.0098 |
| P1 cortex | CCACACCTAC CCTCCCACCC (2)
| 9 | 0.009 |
| Hypothalamus | CCTCCCACCC (2) CTTCCTGGAC (2) TGCACACCCT
| 9 | 0.009 |
| E12.5 retina | CCACACCTAC CCTCCCACCC (2) TGCACACCCT
| 13.2 | 0.0132 |
| E14.5 retina | GAACTGGACT
| 1.8 | 0.0018 |
| E16.5 retina | CCACACCTAC CCTCCCACCC (2) CTTCCTGGAC (2)
| 14.5 | 0.0145 |
| E18.5 retina | CCTCCCACCC (2) GAACTGGACT
| 7.2 | 0.0072 |
| P0.5 retina | CCACACCTAC CCTCCACCCA CCTCCCACCC (2)
| 6 | 0.006 |
| P2.5 retina | CCACACCTAC CCTCCCACCC (2) GAACTGGACT
| 5.4 | 0.0054 |
| P4.5 retina | CCACACCTAC CCTCCCACCC (2) TGCACACCCT
| 8 | 0.008 |
| P6.5 retina | CCTCCACCCA TGCACACCCT
| 3.4 | 0.0034 |
| P10.5 crx- retina | CCTCCCACCC (2)
| 1.9 | 0.0019 |
| P10.5 crx+ retina | CCTCCCACCC (2) CTTCCTGGAC (2)
| 7.7 | 0.0077 |
| Adult retinal | CCTCCACCCA CCTCCCACCC (2) GCTCCACCTG
| 9.3 | 0.0093 |
| ONL | CCTCCACCCA GAACTGGACT
| 5.7 | 0.0057 |