Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.249391
Hectd1
HECT domain containing 1
12
207304
Gene Ontology
ligase activity
Human Homolog
HECTD1[HECT domain containing 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 31 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGCATAGTG
AGTCCTATTT
(
3
)
3.2
0.0032
Cb medulloblastoma
AAGAATCATC
GTGCAAATCC
4.6
0.0046
P8 GC+1d culture
AAATAAAGCA (
3
)
AAGAATCATC
2.2
0.0022
P8 GC+SHH+1d culture
AAATAAAGCA (
3
)
4.7
0.0047
3T3 fibroblasts
GTGCAAATCC
3.5
0.0035
E15 cortex
GTGCAAATCC
9.9
0.0099
P1 cortex
GTGCAAATCC
9.1
0.0091
Hypothalamus
AAATAAAGCA (
3
)
1.8
0.0018
E12.5 retina
AAATAAAGCA (
3
)
CTTTTAATCT
3.8
0.0038
E14.5 retina
CTTTTAATCT
1.8
0.0018
E16.5 retina
AAATAAAGCA (
3
)
3.6
0.0036
E18.5 retina
AAATAAAGCA (
3
)
AAATAGAACA
5.4
0.0054
P0.5 retina
AAATAAAGCA (
3
)
AAGAATCATC
AGTCCTATTT
(
3
)
6
0.006
P2.5 retina
AAATAAAGCA (
3
)
AAGCATAGTG
3.6
0.0036
P4.5 retina
AAATAAAGCA (
3
)
AAGAATCATC
AGTCCTATTT
(
3
)
CTTTTAATCT
8
0.008
P6.5 retina
AAATAAAGCA (
3
)
1.7
0.0017
P10.5 crx- retina
AAATAAAGCA (
3
)
AAATAGAACA
3.8
0.0038
Adult retinal
AAGAATCATC
AAGCATAGTG
3.8
0.0038
