| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAGAA ACAGGAAAAA CATTGCCTTC GAAAAAAAAA (2)
| 68.5 | 0.0685 |
| Cb medulloblastoma | AAAAAAAGAA CATTGCCTTC GAAAAAAAAA (2) TGCATCAAGG
| 182.6 | 0.1826 |
| P8 GC+1d culture | AAAAAAAGAA CATTGCCTTC GAAAAAAAAA (2)
| 50.2 | 0.0502 |
| P8 GC+SHH+1d culture | CATTGCCTTC GAAAAAAAAA (2) GAAAAAAACA
| 86.7 | 0.0867 |
| E15 cortex | CATTGCCTTC GAAAAAAAAA (2) TGCATCAAGG
| 64.2 | 0.0642 |
| P1 cortex | GAAAAAAAAA (2)
| 45.5 | 0.0455 |
| Hypothalamus | AAAAAAAGAA ACAGGAAAAA CATTGCCTTC GAAAAAAAAA (2)
| 76 | 0.076 |
| E12.5 retina | AAAAAAAGAA CATTGCCTTC GAAAAAAAAA (2)
| 54.4 | 0.0544 |
| E14.5 retina | CATTGCCTTC GAAAAAAAAA (2) GAAAAAAACA
| 41.9 | 0.0419 |
| E16.5 retina | CATTGCCTTC GAAAAAAAAA (2)
| 28.9 | 0.0289 |
| E18.5 retina | CATTGCCTTC GAAAAAAAAA (2) GAAAAAAACA
| 74.6 | 0.0746 |
| P0.5 retina | CATTGCCTTC GAAAAAAAAA (2)
| 41.2 | 0.0412 |
| P2.5 retina | AAAAAAAGAA ACAGGAAAAA CATTGCCTTC GAAAAAAAAA (2)
| 102 | 0.102 |
| P4.5 retina | CATTGCCTTC GAAAAAAAAA (2)
| 63.4 | 0.0634 |
| P6.5 retina | CATTGCCTTC GAAAAAAAAA (2)
| 51.7 | 0.0517 |
| P10.5 crx- retina | CATTGCCTTC GAAAAAAAAA (2)
| 18.6 | 0.0186 |
| P10.5 crx+ retina | CATTGCCTTC GAAAAAAAAA (2) TGCATCAAGG
| 55.7 | 0.0557 |
| Adult retinal | AAAAAAAGAA CATTGCCTTC GAAAAAAAAA (2)
| 31.5 | 0.0315 |
| ONL | AAAAAAAGAA CATTGCCTTC GAAAAAAAAA (2)
| 42.1 | 0.0421 |