Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.25203	Nckap1	NCK-associated protein 1	2	2 48.0 cM	50884
Mm.25203	AW822080	expressed sequence AW822080	2		99433
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 97 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCGACGCCCC (2) CTGCCGCCGC (3) CTGTTGTATT (4) GAATTCAAAG GCGTATCTTT TGCTGCTGTC 22.8 0.0228 Cb medulloblastoma ACCTCCCTAA (2) CTGCCGCCGC (3) GAATTCAAAG GCAGACAACT (2) GCGTATCTTT TGGAAGGTTA (2) 30 0.03 P8 GC+1d culture CCGACGCCCC (2) CTGCCGCCGC (3) CTGTTGTATT (4) GAAGAAAAAA (3) GAATTCAAAG TGCTGCTGTC TGGAAGGTTA (2) 35.3 0.0353 P8 GC+SHH+1d culture CCGACGCCCC (2) CTGCCGCCGC (3) CTGTTGTATT (4) GAAGAAAAAA (3) GAATTCAAAG GCGTATCTTT TGCTGCTGTC TGGAAGGTTA (2) 35.2 0.0352 3T3 fibroblasts CCGACGCCCC (2) CTGCCGCCGC (3) TGCTGCTGTC 38.5 0.0385 E15 cortex CTGCCGCCGC (3) GAATTCAAAG GCGTATCTTT 49.4 0.0494 P1 cortex CTGCCGCCGC (3) GAATTCAAAG 31.8 0.0318 Hypothalamus CCGACGCCCC (2) CTGCCGCCGC (3) GCAGACAACT (2) 18 0.018 E12.5 retina CCGACGCCCC (2) CTGCCGCCGC (3) GAAGAAAAAA (3) GAATTCAAAG TGCTGCTGTC 20.7 0.0207 E14.5 retina CCGACGCCCC (2) CTGCCGCCGC (3) GAAGAAAAAA (3) GAATTCAAAG GCAGACAACT (2) TGCTGCTGTC TGGAAGGTTA (2) 25.3 0.0253 E16.5 retina CCGACGCCCC (2) GAATTCAAAG 19.9 0.0199 E18.5 retina CCGACGCCCC (2) CTGCCGCCGC (3) GCGTATCTTT TGGAAGGTTA (2) 7.2 0.0072 P0.5 retina CCGACGCCCC (2) CTGCCGCCGC (3) CTGTTGTATT (4) GAATTCAAAG TGGAAGGTTA (2) 25.6 0.0256 P2.5 retina CCGACGCCCC (2) CTGCCGCCGC (3) GAAGAAAAAA (3) GAATTCAAAG TGGAAGGTTA (2) 22.9 0.0229 P4.5 retina AAACTGTGTC (2) CCGACGCCCC (2) CTGCCGCCGC (3) GAATTCAAAG GTAACCCAGC (2) TGCTGCTGTC TGGAAGGTTA (2) 29.8 0.0298 P6.5 retina AAACTGTGTC (2) CCGACGCCCC (2) CTGCCGCCGC (3) GAAGAAAAAA (3) GAATTCAAAG GTAACCCAGC (2) TGGAAGGTTA (2) 26.7 0.0267 P10.5 crx- retina CCGACGCCCC (2) CTGCCGCCGC (3) GAATTCAAAG 14.9 0.0149 P10.5 crx+ retina CTGCCGCCGC (3) GCAGACAACT (2) GTAACCCAGC (2) TGCTGCTGTC 19.2 0.0192 Adult retinal ACCTCCCTAA (2) CCGACGCCCC (2) CTGCCGCCGC (3) GAATTCAAAG 20.5 0.0205 ONL AAACTGTGTC (2) ACCTCCCTAA (2) CCGACGCCCC (2) CTGCCGCCGC (3) GAAGAAAAAA (3) GAATTCAAAG 22.9 0.0229