Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.252255	Psma2	proteasome (prosome, macropain) subunit, alpha type 2	13		19166
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | peptidase activity | proteasome core complex (sensu Eukarya) | ubiquitin-dependent protein catabolism
Human Homolog	PSMA2[proteasome (prosome, macropain) subunit, alpha type, 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAGTCGA AAGCTGGTTT (2) ATAAACTTTT (2) GTTTAGTGGA 49 0.049 Cb medulloblastoma AAGCTGGTTT (2) CAGCCATCTA GTTTAGTGGA 30 0.03 P8 GC+1d culture AAGCTGGTTT (2) CAGCCATCTA GGCCCCGATT GTTAAGTGGA GTTTAGTGGA 37.5 0.0375 P8 GC+SHH+1d culture AAGCTGGTTT (2) ATAAACTTTT (2) GTTTAGTGGA 46.8 0.0468 3T3 fibroblasts AAGCTGGTTT (2) GTTTAGTGGA 10.5 0.0105 E15 cortex GGCCCCGATT GTTTAGTGGA 19.7 0.0197 P1 cortex GTTTAGTGGA 27.3 0.0273 Hypothalamus AAAAAGTCGA AAGCTGGTTT (2) GTTTAGTGGA TAATAAAAGT (2) 37.9 0.0379 E12.5 retina AAGCTGGTTT (2) ATAAACTTTT (2) GTTTAGTGGA TAATAAAAGT (2) TTTAGTGGAT (4) 52.5 0.0525 E14.5 retina AAAAAGTCGA AAGCTGGTTT (2) ATAAACTTTT (2) GTTTAGTGGA 40.1 0.0401 E16.5 retina AAGCTGGTTT (2) ATAAACTTTT (2) GGCCCCGATT GTTTAGTGGA 41.6 0.0416 E18.5 retina AAGCTGGTTT (2) ATAAACTTTT (2) GTTTAGTGGA TAATAAAAGT (2) 71 0.071 P0.5 retina AAGCTGGTTT (2) GTTTAGTGGA TAATAAAAGT (2) 29.5 0.0295 P2.5 retina AAGCTGGTTT (2) ATAAACTTTT (2) GTTTAGTGGA TTTAGTGGAT (4) 56.3 0.0563 P4.5 retina AAGCTGGTTT (2) ATAAACTTTT (2) GTTAAGTGGA GTTTAGTGGA TAATAAAAGT (2) 49.5 0.0495 P6.5 retina AAGCTGGTTT (2) ATAAACTTTT (2) GTTTAGTGGA TAATAAAAGT (2) 41.8 0.0418 P10.5 crx- retina AAAAAGTCGA AAGCTGGTTT (2) ATAAACTTTT (2) GGCCCCGATT GTTTAGTGGA 24.3 0.0243 P10.5 crx+ retina AAGCTGGTTT (2) ATAAACTTTT (2) CAGCCATCTA GTTTAGTGGA 38.4 0.0384 Adult retinal AAGCTGGTTT (2) GTTTAGTGGA 20.4 0.0204 ONL ATAAACTTTT (2) GTTAAGTGGA GTTTAGTGGA 11.5 0.0115