Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.253065
Nr2c2
nuclear receptor subfamily 2, group C, member 2
6
22026
Mm.253065
9430019H13Rik
RIKEN cDNA 9430019H13 gene
6
77250
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 27 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CACAAGGTCT
(
3
)
CAGCAGAATA
CTAGGCAAGC (
2
)
9.8
0.0098
Cb medulloblastoma
CTAGGCAAGC (
2
)
GGGCTCAAGG
(
2
)
4.6
0.0046
P8 GC+1d culture
CACAAGGTCT
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
CACAAGGTCT
(
3
)
GAATGGAGCA
(
3
)
GGGCTCAAGG
(
2
)
3.6
0.0036
E15 cortex
CACAAGGTCT
(
3
)
4.9
0.0049
Hypothalamus
CTAGGCAAGC (
2
)
1.8
0.0018
E12.5 retina
GAATGGAGCA
(
3
)
1.9
0.0019
E16.5 retina
CTAGGCAAGC (
2
)
GGGCTCAAGG
(
2
)
3.6
0.0036
E18.5 retina
CTAGGCAAGC (
2
)
3.6
0.0036
P0.5 retina
CACAAGGTCT
(
3
)
2
0.002
P2.5 retina
CTAGGCAAGC (
2
)
GAATGGAGCA
(
3
)
5.3
0.0053
P6.5 retina
CTAGGCAAGC (
2
)
1.7
0.0017
P10.5 crx- retina
CAGCAGAATA
CTAGGCAAGC (
2
)
3.8
0.0038
P10.5 crx+ retina
CAGCAGAATA
CTAGGCAAGC (
2
)
7.7
0.0077
Adult retinal
CTAGGCAAGC (
2
)
GAATGGAGCA
(
3
)
3.8
0.0038
ONL
CTAGGCAAGC (
2
)
GGGCTCAAGG
(
2
)
5.7
0.0057
