| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GATAATGCAC (3) GGACTATGCA (3)
| 13 | 0.013 |
| Cb medulloblastoma | GATAATGCAC (3)
| 16.2 | 0.0162 |
| P8 GC+1d culture | GATAATGCAC (3)
| 28.5 | 0.0285 |
| P8 GC+SHH+1d culture | GATAATGCAC (3) TGGCTGATTA (3)
| 30.5 | 0.0305 |
| 3T3 fibroblasts | GATAATGCAC (3)
| 17.5 | 0.0175 |
| E15 cortex | GATAATGCAC (3)
| 4.9 | 0.0049 |
| Hypothalamus | ATATGCACTC GATAATGCAC (3) GTATGCACTC (2)
| 29 | 0.029 |
| E12.5 retina | GATAATGCAC (3) GTATGCACTC (2)
| 33.8 | 0.0338 |
| E14.5 retina | ATATGCACTC GATAATGCAC (3) GTATGCACTC (2)
| 49.1 | 0.0491 |
| E16.5 retina | GATAATGCAC (3) GTATGCACTC (2)
| 25.3 | 0.0253 |
| E18.5 retina | GATAATGCAC (3) GATAATGCCC (3) GTATGCACTC (2)
| 34.6 | 0.0346 |
| P0.5 retina | GATAATGCAC (3) GGACTATGCA (3) TGGCTGATTA (3)
| 35.4 | 0.0354 |
| P2.5 retina | GATAATGCAC (3) GATAATGCCC (3) GGACTATGCA (3)
| 30 | 0.03 |
| P4.5 retina | GATAATGCAC (3) GATAATGCCC (3)
| 25.8 | 0.0258 |
| P6.5 retina | GATAATGCAC (3)
| 25 | 0.025 |
| P10.5 crx- retina | GATAATGCAC (3) GATAATGCCC (3) TGGCTGATTA (3)
| 46.5 | 0.0465 |
| P10.5 crx+ retina | GATAATGCAC (3)
| 32.7 | 0.0327 |
| Adult retinal | ATATGCACTC GATAATGCAC (3) GTATGCACTC (2) TGGCTGATTA (3)
| 20.5 | 0.0205 |
| ONL | GATAATGCAC (3) GTATGCACTC (2)
| 30.6 | 0.0306 |