| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAACCACACA (5) TATGTAATAA TCCCTTCAGA (5) TTAACTTCAA
| 11.3 | 0.0113 |
| Cb medulloblastoma | CAGGCAAACA TATGTAATAA TGATGTGTAC (5)
| 11.5 | 0.0115 |
| P8 GC+1d culture | TATGTAATAA TGATGTGTAC (5) TTAACTTCAA
| 14.8 | 0.0148 |
| P8 GC+SHH+1d culture | AGAGTTCAAA TATGTAATAA TCAGGGGCTG TTAACTTCAA
| 17.5 | 0.0175 |
| 3T3 fibroblasts | CAGGCAAACA TCCCTTCAGA (5)
| 7 | 0.007 |
| P1 cortex | AAATTCATAG (4)
| 4.5 | 0.0045 |
| Hypothalamus | AACACACACA (5) GCACAGCTGC (4) TATGTAATAA
| 10.8 | 0.0108 |
| E12.5 retina | AAACCACACA (5) AGAGTTCAAA CAGGCAAACA TCAGGGGCTG
| 15.1 | 0.0151 |
| E14.5 retina | AAACCACACA (5) AAATTCATAG (4) AACACACACA (5) AGAGTTCAAA CAGGCAAACA
| 9 | 0.009 |
| E16.5 retina | AAACCACACA (5) AACACACACA (5) AGAGTTCAAA
| 7.2 | 0.0072 |
| E18.5 retina | AAATTCATAG (4) AGAGTTCAAA GCACAGCTGC (4) TATGTAATAA
| 14.6 | 0.0146 |
| P0.5 retina | CAGGCAAACA GCACAGCTGC (4) TCAGGGGCTG TGATGTGTAC (5)
| 11.8 | 0.0118 |
| P2.5 retina | AGAGTTCAAA CAGGCAAACA TATGTAATAA
| 10.5 | 0.0105 |
| P4.5 retina | AAACCACACA (5) AACACACACA (5) AGAGTTCAAA CAGGCAAACA TATGTAATAA
| 23.9 | 0.0239 |
| P6.5 retina | AAACCACACA (5) AACACACACA (5) AGAGTTCAAA CAGGCAAACA GCACAGCTGC (4) TATGTAATAA TCAGGGGCTG TGATGTGTAC (5)
| 23.6 | 0.0236 |
| P10.5 crx- retina | AGAGTTCAAA TATGTAATAA TGATGTGTAC (5)
| 5.7 | 0.0057 |
| P10.5 crx+ retina | AACACACACA (5) AGAGTTCAAA CAGGCAAACA TCAGGGGCTG TGATGTGTAC (5) TTAACTTCAA
| 24.9 | 0.0249 |
| Adult retinal | AACACACACA (5) AGAGTTCAAA CAGGCAAACA TCAGGGGCTG
| 11.2 | 0.0112 |
| ONL | AAATTCATAG (4) AACACACACA (5) CAGGCAAACA TATGTAATAA
| 36.3 | 0.0363 |