Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.25339	Mta2	metastasis-associated gene family, member 2	19	19 B	23942
Gene Ontology	chromatin remodeling | chromatin remodeling complex | DNA binding | DNA packaging | histone deacetylase activity | histone deacetylase complex | negative regulation of transcription from Pol II promoter | nucleus | NuRD complex | positive regulation of transcription from Pol II promoter | protein binding | regulation of transcription, DNA-dependent | transcription factor activity | transcriptional activator activity | transcriptional repressor activity
Human Homolog	MTA2[metastais-associated gene family, member 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 121 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCACTCTTT GGCTGGGGTT TGATGTTTCA TGGAAAACAC (3) TTTTTAATGT 133.8 0.1338 Cb medulloblastoma GAGGCTCTGC TGATGTTTCA TTTTTAATGT 20.7 0.0207 P8 GC+1d culture CTGTTTTGAA (3) GAGGCTCTGC GCAGTGTACT GCTGGCAGGG GGCCTGGGCC (2) TCTCATTTTT TGACTAGTGT TGATGTTTCA TTTTTAATGT 179.2 0.1792 P8 GC+SHH+1d culture CAGTGCCGAC CTCACTCTTT CTGTTTTGAA (3) GAGGCTCTGC GCAGTGTACT GCTGGCAGGG GGCCTGGGCC (2) GGCTGGGGTT TGATGTTTCA TGGAAAACAC (3) TTTTTAATGT 153.4 0.1534 3T3 fibroblasts AGAGAGACAA (2) GAGGCTCTGC GCTGGCAGGG TTTTTAATGT 38.5 0.0385 E15 cortex GCTGGCAGGG GGCTGGGGTT TTTTTAATGT 14.7 0.0147 P1 cortex GAGGCTCTGC GCAGTGTACT GCTGGCAGGG TTTTTAATGT 81.7 0.0817 Hypothalamus CAGTGCCGAC CTGTTTTGAA (3) GAGGCTCTGC GGCCTGGGCC (2) TTTTTAATGT 32.5 0.0325 E12.5 retina CTCACTCTTT GAGGCTCTGC GCAGTGTACT GGCCTGGGCC (2) GGCTGGGGTT TGATGTTTCA TGGAAAACAC (3) TTTTTAATGT 94 0.094 E14.5 retina GCAGTGTACT GGCTGGGGTT TGATGTTTCA TTTTTAATGT 91 0.091 E16.5 retina CTCACTCTTT CTGTTTTGAA (3) GGCCTGGGCC (2) GGCTGGGGTT TGATGTTTCA TTTTTAATGT 119.5 0.1195 E18.5 retina CTCACTCTTT GCAGTGTACT GGCTGGGGTT TTTTTAATGT 156.4 0.1564 P0.5 retina CTCACTCTTT GAGGCTCTGC GGCCTGGGCC (2) GGCTGGGGTT TGACTAGTGT TGATGTTTCA TGGAAAACAC (3) TTTTTAATGT 74.7 0.0747 P2.5 retina CTCACTCTTT CTGTTTTGAA (3) GAGGCTCTGC GCAGTGTACT GGCCTGGGCC (2) TGACTAGTGT TGATGTTTCA TTTTTAATGT 148 0.148 P4.5 retina CTCACTCTTT CTGTTTTGAA (3) GCTGGCAGGG GGCCTGGGCC (2) TGACTAGTGT TTTTTAATGT 148.7 0.1487 P6.5 retina CAGTGCCGAC CTCACTCTTT CTGTTTTGAA (3) GAGGCTCTGC GCTGGCAGGG TGACTAGTGT TTTTTAATGT 136.8 0.1368 P10.5 crx- retina CTGTTTTGAA (3) GAGGCTCTGC GGCTGGGGTT TCTCATTTTT TTTTTAATGT 115.4 0.1154 P10.5 crx+ retina CTCACTCTTT GAGGCTCTGC GCAGTGTACT GCTGGCAGGG GGCCTGGGCC (2) TCTCATTTTT TGACTAGTGT TTTTTAATGT 92.2 0.0922 Adult retinal CTCACTCTTT CTGTTTTGAA (3) GAGGCTCTGC GCAGTGTACT GGCCTGGGCC (2) TGACTAGTGT TTTTTAATGT 44.6 0.0446 ONL CTCACTCTTT GCAGTGTACT GCTGGCAGGG GGCTGGGGTT TGACTAGTGT TTTTTAATGT 78.5 0.0785