| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAAAAGCCTT (2) TACATAAAAT (2)
| 6.5 | 0.0065 |
| Cb medulloblastoma | GTAAAGATGA
| 2.3 | 0.0023 |
| P8 GC+1d culture | GAAAAGCCTT (2) TACATAAAAT (2)
| 3.4 | 0.0034 |
| P8 GC+SHH+1d culture | GTAAAGATGA TACATAAAAT (2)
| 4.7 | 0.0047 |
| 3T3 fibroblasts | GAAAAGCCTT (2) TACATAAAAT (2)
| 10.5 | 0.0105 |
| E15 cortex | TACATAAAAT (2)
| 4.9 | 0.0049 |
| P1 cortex | GAAAAGCCTT (2) GTAAAGATGA
| 13.6 | 0.0136 |
| Hypothalamus | GAAAAGCCTT (2) TAAATGTATT TACATAAAAT (2)
| 9 | 0.009 |
| E12.5 retina | GAAAAGCCTT (2) TACATAAAAT (2)
| 5.7 | 0.0057 |
| E14.5 retina | GAAAAGCCTT (2) TACATAAAAT (2)
| 9.1 | 0.0091 |
| E16.5 retina | GAAAAGCCTT (2) TAAATGTATT TACATAAAAT (2)
| 7.2 | 0.0072 |
| E18.5 retina | GAAAAGCCTT (2) TACATAAAAT (2)
| 14.5 | 0.0145 |
| P0.5 retina | GAAAAGCCTT (2) TAAATGTATT
| 4 | 0.004 |
| P2.5 retina | GAAAAGCCTT (2) TAAATGTATT TACATAAAAT (2)
| 7.1 | 0.0071 |
| P4.5 retina | TACATAAAAT (2)
| 7.9 | 0.0079 |
| P6.5 retina | TAAATGTATT TACATAAAAT (2)
| 10 | 0.01 |
| P10.5 crx- retina | GAAAAGCCTT (2) TAAATGTATT TACATAAAAT (2)
| 13 | 0.013 |
| P10.5 crx+ retina | TAAATGTATT TACATAAAAT (2)
| 7.7 | 0.0077 |
| Adult retinal | GAAAAGCCTT (2)
| 1.9 | 0.0019 |
| ONL | TAAATGTATT TACATAAAAT (2)
| 5.7 | 0.0057 |