Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.254297	Atp7a	ATPase, Cu++ transporting, alpha polypeptide	X	X 44.0 cM	11977
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | catalytic activity | cation transport | copper ion binding | copper ion transport | copper ion transporter activity | copper-exporting ATPase activity | Golgi apparatus | hydrogen/potassium-exchanging ATPase activity | hydrogen/potassium-exchanging ATPase complex | hydrolase activity | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | integral to membrane | magnesium ion binding | membrane | metabolism | metal ion binding | metal ion transport | metal ion transporter activity
Human Homolog	ATP7A[ATPase, Cu++ transporting, alpha polypeptide (Menkes syndrome)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGACCCTGTC (2) AGACTGACAT CTTTGTTTTA TATGTGTGTG 16.3 0.0163 Cb medulloblastoma AGACCCTGTC (2) AGACTGACAT 25.4 0.0254 P8 GC+1d culture AGACCCTGTC (2) TATGTGTGTG 10.3 0.0103 P8 GC+SHH+1d culture AGACCCTGTC (2) TATGTGTGTG 9.4 0.0094 3T3 fibroblasts TATGTGTGTG 3.5 0.0035 E15 cortex AGACCCTGTC (2) 14.8 0.0148 P1 cortex AGACCCTGTC (2) TATGTGTGTG 13.6 0.0136 Hypothalamus AGACCCTGTC (2) 1.8 0.0018 E12.5 retina AGACCCTGTC (2) TATGTGTGTG 7.5 0.0075 E14.5 retina AGACCCTGTC (2) 5.5 0.0055 E16.5 retina AGACCCTGTC (2) CTTTGTTTTA 5.4 0.0054 E18.5 retina AGACCCTGTC (2) AGACTGACAT 12.7 0.0127 P0.5 retina AGACCCTGTC (2) TATGTGTGTG 5.9 0.0059 P2.5 retina AGACCCTGTC (2) TATGTGTGTG 14.1 0.0141 P4.5 retina AGACCCTGTC (2) 7.9 0.0079 P6.5 retina AGACCCTGTC (2) 6.7 0.0067 P10.5 crx- retina AGACCCTGTC (2) TATGTGTGTG 3.8 0.0038 P10.5 crx+ retina AGACCCTGTC (2) TATGTGTGTG 13.4 0.0134 Adult retinal AGACCCTGTC (2) TATGTGTGTG 14.9 0.0149 ONL AGACCCTGTC (2) 17.2 0.0172