Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.254438	D15Ertd55e	DNA segment, Chr 15, ERATO Doi 55, expressed	15	15 49.9 cM	52458
Mm.254438	LOC380958	similar to bromodomain containing protein 1; BR140-like gene	15		380958
Mm.254438	Brd1	bromodomain containing 1	15		223770
Gene Ontology	biological_process unknown | molecular_function unknown | nucleus
Human Homolog	BRD1[bromodomain containing 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGATGTATAT (4) TTTGTAATAT (3) 9.8 0.0098 Cb medulloblastoma TGATGTATAT (4) TTTGTAATAT (3) 4.6 0.0046 P8 GC+1d culture TAGATTTAAA (3) TGATGTATAT (4) TTTGTAATAT (3) TTTGTATATT (3) 6.7 0.0067 P8 GC+SHH+1d culture TAGATTTAAA (3) TGATGTATAT (4) TTTGTAATAT (3) 9.4 0.0094 3T3 fibroblasts TGATGTATAT (4) 3.5 0.0035 Hypothalamus TAGATTTAAA (3) TGATGTATAT (4) TGGATTTCCA (2) TTTGTAATAT (3) TTTGTATATT (3) 19.9 0.0199 E12.5 retina TACCATACAA (3) TGATGTATAT (4) TTTGTATATT (3) 16.9 0.0169 E14.5 retina TACCATACAA (3) TGATGTATAT (4) 27.3 0.0273 E16.5 retina TGATGTATAT (4) 25.4 0.0254 E18.5 retina TACCATACAA (3) TAGATTTAAA (3) TGATGTATAT (4) 41.8 0.0418 P0.5 retina AATCATCTGA (3) TACCATACAA (3) TGATGTATAT (4) 15.7 0.0157 P2.5 retina AATCATCTGA (3) TAGATTTAAA (3) TGATGTATAT (4) TTTGTAATAT (3) TTTGTATATT (3) 23 0.023 P4.5 retina TGATGTATAT (4) TTTGTAATAT (3) 21.8 0.0218 P6.5 retina TGATGTATAT (4) TGGATTTCCA (2) TTTGTAATAT (3) 9.9 0.0099 P10.5 crx- retina TGATGTATAT (4) 11.1 0.0111 P10.5 crx+ retina TAGATTTAAA (3) TGATGTATAT (4) TTTGTAATAT (3) 15.3 0.0153 Adult retinal TTTGTAATAT (3) 1.9 0.0019 ONL TTTGTAATAT (3) 1.9 0.0019