| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GTCTCTCTTC (2) TAACAAATAA TTACATAAAA (4)
| 6.5 | 0.0065 |
| Cb medulloblastoma | GTCAGCTGCT TAACAAATAG TTACATAAAA (4)
| 6.9 | 0.0069 |
| P8 GC+1d culture | TAACAAATAG TTACATAAAA (4)
| 11.4 | 0.0114 |
| P8 GC+SHH+1d culture | AGACTCTGTT (2) GTCAGCTGCT GTCTCTCTTC (2) TAACAAATAG TTACATAAAA (4)
| 15.3 | 0.0153 |
| E15 cortex | GTCAGCTGCT
| 4.9 | 0.0049 |
| Hypothalamus | GTCAGCTGCT GTCTCTCTTC (2) TAACAAATAG TTACATAAAA (4)
| 16.3 | 0.0163 |
| E12.5 retina | GTCAGCTGCT TTACATAAAA (4)
| 3.8 | 0.0038 |
| E14.5 retina | GTCAGCTGCT TAACAAATAG TTACATAAAA (4)
| 16.4 | 0.0164 |
| E16.5 retina | GTCAGCTGCT GTCTCTCTTC (2) TAACAAATAG TTACATAAAA (4)
| 14.5 | 0.0145 |
| E18.5 retina | AGACTCTGTT (2) GTCTCTCTTC (2)
| 3.6 | 0.0036 |
| P0.5 retina | TTACATAAAA (4)
| 5.9 | 0.0059 |
| P2.5 retina | AGACTCTGTT (2) TTACATAAAA (4)
| 5.3 | 0.0053 |
| P4.5 retina | TAACAAATAG TTACATAAAA (4)
| 6 | 0.006 |
| P6.5 retina | GTCTCTCTTC (2) TAACAAATAA TAACAAATAG
| 10 | 0.01 |
| P10.5 crx- retina | TAACAAATAG TTACATAAAA (4)
| 3.8 | 0.0038 |
| P10.5 crx+ retina | TAACAAATAA TTACATAAAA (4)
| 3.8 | 0.0038 |
| Adult retinal | TAACAAATAG
| 3.7 | 0.0037 |
| ONL | AGACTCTGTT (2) TAACAAATAA
| 3.8 | 0.0038 |