Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.255539	Rad23a	RAD23a homolog (S. cerevisiae)	8		19358
Gene Ontology	DNA repair | nucleotide-excision repair | nucleus | response to DNA damage stimulus
Human Homolog	RAD23A[RAD23 homolog A (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGAGGGGAA (2) CCTAAAAAAA (2) GCTGGCTGGC (3) 6.5 0.0065 Cb medulloblastoma ATGAGGGGAA (2) CCTAAAAAAA (2) 6.9 0.0069 P8 GC+1d culture ATGAGGGGAA (2) CCTAAAAAAA (2) CGGCAAGTGA GAAATAAGCC GCCAAGATGC (2) GCTGGCTGGC (3) GTGAGACAAA 8.9 0.0089 P8 GC+SHH+1d culture ATGAGGGGAA (2) GCCAAGATGC (2) GCTGGCTGGC (3) 4.7 0.0047 3T3 fibroblasts GCCAAGATGC (2) GCTGGCTGGC (3) GGCTACGAGC (3) 10.5 0.0105 E15 cortex GCCAAGATGC (2) 14.8 0.0148 P1 cortex ATGAGGGGAA (2) GCCAAGATGC (2) GCTGGCTGGC (3) 18.1 0.0181 Hypothalamus ATGAGGGGAA (2) GCCAAGATGC (2) GTGAGACAAA 7.2 0.0072 E14.5 retina AGCGTCTGCA GCTGGCTGGC (3) GGTCTGTCCA (3) 5.4 0.0054 E16.5 retina CCTAAAAAAA (2) GAAATAAGCC GCCAAGATGC (2) GGCTACGAGC (3) 7.2 0.0072 E18.5 retina CCTAAAAAAA (2) GGCTACGAGC (3) GTGAGACAAA 7.2 0.0072 P0.5 retina ATGAGGGGAA (2) CCTAAAAAAA (2) CGGCAAGTGA GAACCTGACG (2) GCCAAGATGC (2) GCTGGCTGGC (3) 21.7 0.0217 P2.5 retina ATGAGGGGAA (2) GAAATAAGCC GCCAAGATGC (2) GTGAGACAAA 14.1 0.0141 P4.5 retina ATGAGGGGAA (2) CCTAAAAAAA (2) GCCAAGATGC (2) GTGAGACAAA 14 0.014 P6.5 retina AGCGTCTGCA ATGAGGGGAA (2) CCTAAAAAAA (2) CGGCAAGTGA GAAATAAGCC GAACCTGACG (2) 10.2 0.0102 P10.5 crx- retina ATGAGGGGAA (2) CCTAAAAAAA (2) GAACCTGACG (2) GCCAAGATGC (2) GTGAGACAAA 11.3 0.0113 P10.5 crx+ retina AGCGTCTGCA CCTAAAAAAA (2) GCCAAGATGC (2) GCTGGCTGGC (3) 23 0.023 Adult retinal AGCGTCTGCA ATGAGGGGAA (2) CCTAAAAAAA (2) GAACCTGACG (2) GCCAAGATGC (2) 66.7 0.0667 ONL AGCGTCTGCA ATGAGGGGAA (2) GCCAAGATGC (2) GGTCTGTCCA (3) 76.5 0.0765