| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) AGAAAAAAAA (2) ATTGGGTATA
| 225.1 | 0.2251 |
| Cb medulloblastoma | AAAAAAAAAA (2) AGAAAAAAAA (2) CACCCCCAAG (2) CTTATAACAA
| 857.9 | 0.8579 |
| P8 GC+1d culture | AAAAAAAAAA (2) AGAAAAAAAA (2)
| 212.3 | 0.2123 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) AGAAAAAAAA (2) ATTGGGTATA CACCCCCAAG (2)
| 299.9 | 0.2999 |
| 3T3 fibroblasts | AAAAAAAAAA (2) AGAAAAAAAA (2) CACCCCCAAG (2)
| 38.5 | 0.0385 |
| E15 cortex | AAAAAAAAAA (2) AGAAAAAAAA (2) CACCCCCAAG (2)
| 237.5 | 0.2375 |
| P1 cortex | AAAAAAAAAA (2) AGAAAAAAAA (2) ATTGGGTATA CACCCCCAAG (2)
| 272.6 | 0.2726 |
| Hypothalamus | AAAAAAAAAA (2) AGAAAAAAAA (2) CACCCCCAAG (2) CTTATAACAA
| 159.4 | 0.1594 |
| E12.5 retina | AAAAAAAAAA (2) AGAAAAAAAA (2) CACCCCCAAG (2)
| 161.5 | 0.1615 |
| E14.5 retina | AAAAAAAAAA (2) AGAAAAAAAA (2) ATTGGGTATA
| 116.5 | 0.1165 |
| E16.5 retina | AAAAAAAAAA (2) AGAAAAAAAA (2)
| 54.4 | 0.0544 |
| E18.5 retina | AAAAAAAAAA (2) AGAAAAAAAA (2) CACCCCCAAG (2)
| 409.3 | 0.4093 |
| P0.5 retina | AAAAAAAAAA (2) AGAAAAAAAA (2) CACCCCCAAG (2)
| 139.4 | 0.1394 |
| P2.5 retina | AAAAAAAAAA (2) AGAAAAAAAA (2) CACCCCCAAG (2)
| 352 | 0.352 |
| P4.5 retina | AAAAAAAAAA (2) AGAAAAAAAA (2) CACCCCCAAG (2) CTTATAACAA
| 321 | 0.321 |
| P6.5 retina | AAAAAAAAAA (2) AGAAAAAAAA (2) CACCCCCAAG (2)
| 285.1 | 0.2851 |
| P10.5 crx- retina | AAAAAAAAAA (2) AGAAAAAAAA (2) ATTGGGTATA CACCCCCAAG (2)
| 57.6 | 0.0576 |
| P10.5 crx+ retina | AAAAAAAAAA (2) AGAAAAAAAA (2) CACCCCCAAG (2)
| 103.8 | 0.1038 |
| Adult retinal | AAAAAAAAAA (2) AGAAAAAAAA (2) CACCCCCAAG (2)
| 64.9 | 0.0649 |
| ONL | AAAAAAAAAA (2) AGAAAAAAAA (2)
| 122.6 | 0.1226 |