| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TTCCAGCTGC
| 24.5 | 0.0245 |
| Cb medulloblastoma | GACAGCTCCC GCACGGGACG (2) TTCCAGCTGC
| 74 | 0.074 |
| P8 GC+1d culture | AGGCCCAACT (2) GCACGGGACG (2) TTCCAGCTGC
| 34.2 | 0.0342 |
| P8 GC+SHH+1d culture | AGGCCCAACT (2) GCACGGGACG (2) TTCCAGCTGC
| 50.4 | 0.0504 |
| 3T3 fibroblasts | AGGCCCAACT (2) TATTCAAATA (2) TTCCAGCTGC
| 66.6 | 0.0666 |
| E15 cortex | AGGCCCAACT (2) GCACGGGACG (2) TTCCAGCTGC
| 29.6 | 0.0296 |
| P1 cortex | TTCCAGCTGC
| 9.1 | 0.0091 |
| Hypothalamus | GCACGGGACG (2) TTCCAGCTGC
| 57.9 | 0.0579 |
| E12.5 retina | AGGCCCAACT (2) GCACGGGACG (2) TTCCAGCTGC
| 65.8 | 0.0658 |
| E14.5 retina | GCACGGGACG (2) TTCCAGCTGC
| 20 | 0.02 |
| E16.5 retina | AGGCCCAACT (2) GCACGGGACG (2) TTCCAGCTGC
| 41.6 | 0.0416 |
| E18.5 retina | GCACGGGACG (2) TTCCAGCTGC
| 70.9 | 0.0709 |
| P0.5 retina | GCACGGGACG (2) TTCCAGCTGC
| 60.9 | 0.0609 |
| P2.5 retina | GCACGGGACG (2) TTCCAGCTGC
| 56.3 | 0.0563 |
| P4.5 retina | AGGCCCAACT (2) GACAGCTCCC GCACGGGACG (2) TTCCAGCTGC
| 55.5 | 0.0555 |
| P6.5 retina | GACAGCTCCC GCACGGGACG (2) TTCCAGCTGC
| 83.4 | 0.0834 |
| P10.5 crx- retina | AGGCCCAACT (2) GCACGGGACG (2) TTCCAGCTGC
| 50.2 | 0.0502 |
| P10.5 crx+ retina | GCACGGGACG (2) TTCCAGCTGC
| 94.2 | 0.0942 |
| Adult retinal | AGGCCCAACT (2) GCACGGGACG (2) TTCCAGCTGC
| 89 | 0.089 |
| ONL | GCACGGGACG (2) TATTCAAATA (2) TTCCAGCTGC
| 45.9 | 0.0459 |