| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGGAGTGTC AGATCCAGCT (2) GAAGTGGCCA TCCCCAGCCC (2) TCCCCAGCCT (2)
| 9.7 | 0.0097 |
| P8 GC+1d culture | AGATCCAGCT (2) GGGAGAGGTT (2) GTGTCTGCTT TCCCCAGCCC (2)
| 10.1 | 0.0101 |
| P8 GC+SHH+1d culture | AGATCCAGCT (2) GCCGGGCCCT GGGAGAGGTT (2) TCCCCAGCCC (2)
| 20 | 0.02 |
| 3T3 fibroblasts | AGATCCAGCT (2) GAAGTGGCCA
| 10.5 | 0.0105 |
| E15 cortex | AGATCCAGCT (2) TCCCCAGCCC (2)
| 19.7 | 0.0197 |
| Hypothalamus | AGATCCAGCT (2) GTGTCTGCTT
| 3.6 | 0.0036 |
| E12.5 retina | GTGTCTGCTT TCCCCAGCCC (2)
| 5.7 | 0.0057 |
| E14.5 retina | AGATCCAGCT (2) GTGTCTGCTT TCCCCAGCCT (2)
| 7.2 | 0.0072 |
| E16.5 retina | AGATCCAGCT (2) GTGTCTGCTT
| 7.2 | 0.0072 |
| E18.5 retina | GGGAGAGGTT (2)
| 1.8 | 0.0018 |
| P0.5 retina | AGATCCAGCT (2) GAAGTGGCCA GGGAGAGGTT (2) GTGTCTGCTT TCCCCAGCCC (2) TCCCCAGCCT (2)
| 21.7 | 0.0217 |
| P2.5 retina | AGATCCAGCT (2) GTGTCTGCTT
| 3.6 | 0.0036 |
| P4.5 retina | AGATCCAGCT (2) TCCCCAGCCC (2)
| 4 | 0.004 |
| P6.5 retina | AAGGAGTGTC AGATCCAGCT (2) GTGTCTGCTT TCCCCAGCCC (2) TCCCCAGCCT (2)
| 13.4 | 0.0134 |
| P10.5 crx- retina | AGATCCAGCT (2)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | AGATCCAGCT (2) TCCCCAGCCC (2)
| 3.8 | 0.0038 |
| Adult retinal | AAGGAGTGTC AGATCCAGCT (2) GGGAGAGGTT (2) TCCCCAGCCC (2)
| 22.3 | 0.0223 |
| ONL | AGATCCAGCT (2)
| 1.9 | 0.0019 |