| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAGCCTTC (5) GAACTTGGAA (2) GCCTCTGAGA (3)
| 4.8 | 0.0048 |
| Cb medulloblastoma | AAAAGCCTTC (5) GAACTTGGAA (2) GCCTCTGAGA (3)
| 6.9 | 0.0069 |
| P8 GC+1d culture | GCCTCTGAGA (3)
| 3.4 | 0.0034 |
| P8 GC+SHH+1d culture | AAAAGCCTTC (5) ACTTCAGAAA (4) GAACTTGGAA (2) GCCTCTGAGA (3)
| 9.5 | 0.0095 |
| 3T3 fibroblasts | GAACTTGGAA (2) GCCTCTGAGA (3)
| 7 | 0.007 |
| E15 cortex | GAACTTGGAA (2)
| 4.9 | 0.0049 |
| P1 cortex | GAACTTGGAA (2)
| 4.5 | 0.0045 |
| Hypothalamus | GAACTTGGAA (2) GCCTCTGAGA (3)
| 3.6 | 0.0036 |
| E12.5 retina | GAACTTGGAA (2) GCCTCTGAGA (3)
| 7.5 | 0.0075 |
| E14.5 retina | ACTTCAGAAA (4) GAACTTGGAA (2) GACACACAGT (2) GCCTCTGAGA (3)
| 10.8 | 0.0108 |
| E16.5 retina | GAACTTGGAA (2) GACACACAGT (2) GACTTGGCCA (2) GCCTCTGAGA (3)
| 10.8 | 0.0108 |
| E18.5 retina | GCCTCTGAGA (3)
| 1.8 | 0.0018 |
| P0.5 retina | GAACTTGGAA (2) GACACACAGT (2) GCCTCTGAGA (3)
| 13.8 | 0.0138 |
| P2.5 retina | GAACTTGGAA (2) GCCTCTGAGA (3)
| 3.6 | 0.0036 |
| P4.5 retina | GAACTTGGAA (2) GCCTCTGAGA (3)
| 9.9 | 0.0099 |
| P6.5 retina | ACTTCAGAAA (4) GAACTTGGAA (2)
| 3.4 | 0.0034 |
| P10.5 crx- retina | GAACTTGGAA (2) GACTTGGCCA (2)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | GAACTTGGAA (2) GACTTGGCCA (2) GCCTCTGAGA (3)
| 9.6 | 0.0096 |
| Adult retinal | GAACTTGGAA (2) GCCTCTGAGA (3)
| 5.6 | 0.0056 |