| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAATAAAAAA (2) AGTCTATAAT GCCCAGCGTA
| 9.8 | 0.0098 |
| Cb medulloblastoma | AAATAAAAAA (2) AGTCTATAAT GCCCAGCGTA
| 9.2 | 0.0092 |
| P8 GC+1d culture | AGTCTATAAT GAGGAGAAAG (2)
| 2.2 | 0.0022 |
| P8 GC+SHH+1d culture | AAATAAAAAA (2) AGTCTATAAT GCCCAGCGTA
| 10.5 | 0.0105 |
| 3T3 fibroblasts | GCCCAGCGTA
| 3.5 | 0.0035 |
| E15 cortex | GCCCAGCGTA
| 4.9 | 0.0049 |
| P1 cortex | AAATAAAAAA (2)
| 4.5 | 0.0045 |
| Hypothalamus | AAATAAAAAA (2) AGTCTATAAT
| 12.6 | 0.0126 |
| E12.5 retina | AAATAAAAAA (2)
| 1.9 | 0.0019 |
| E14.5 retina | AAATAAAAAA (2) GCCCAGCGTA
| 7.3 | 0.0073 |
| E16.5 retina | AAATAAAAAA (2)
| 1.8 | 0.0018 |
| E18.5 retina | AAATAAAAAA (2) AGTCTATAAT GAGGAGAAAG (2) GCCCAGCGTA
| 14.5 | 0.0145 |
| P0.5 retina | GCCCAGCGTA
| 2 | 0.002 |
| P2.5 retina | AAATAAAAAA (2) AGTCTATAAT GCCCAGCGTA
| 12.3 | 0.0123 |
| P4.5 retina | AAATAAAAAA (2) AGTCTATAAT GAGGAGAAAG (2) GCCCAGCGTA
| 11.9 | 0.0119 |
| P6.5 retina | AAATAAAAAA (2) AGTCTATAAT GCCCAGCGTA
| 11.7 | 0.0117 |
| P10.5 crx- retina | AAATAAAAAA (2) AGTCTATAAT GAGGAGAAAG (2)
| 7.5 | 0.0075 |
| P10.5 crx+ retina | AAATAAAAAA (2) GCCCAGCGTA
| 3.8 | 0.0038 |
| Adult retinal | AAATAAAAAA (2)
| 1.9 | 0.0019 |
| ONL | AAATAAAAAA (2) AGTCTATAAT
| 5.7 | 0.0057 |