| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) AATTTGAAGT (2) TCTGTTTTTT
| 208.8 | 0.2088 |
| Cb medulloblastoma | AAAAAAAAAA (2)
| 797.8 | 0.7978 |
| P8 GC+1d culture | AAAAAAAAAA (2) CAGACTATAA TCTGTTTTTT
| 210 | 0.21 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) CAGACTATAA
| 279.9 | 0.2799 |
| 3T3 fibroblasts | AAAAAAAAAA (2)
| 28 | 0.028 |
| E15 cortex | AAAAAAAAAA (2)
| 212.8 | 0.2128 |
| P1 cortex | AAAAAAAAAA (2)
| 245.4 | 0.2454 |
| Hypothalamus | AAAAAAAAAA (2) TCTGTTTTTT
| 126.8 | 0.1268 |
| E12.5 retina | AAAAAAAAAA (2) AATTTGAAGT (2)
| 142.7 | 0.1427 |
| E14.5 retina | AAAAAAAAAA (2) AATTTGAAGT (2) TCTGTTTTTT
| 98.3 | 0.0983 |
| E16.5 retina | AAAAAAAAAA (2) AAATCAATGG CAGACTATAA TCTGTTTTTT
| 50.7 | 0.0507 |
| E18.5 retina | AAAAAAAAAA (2) TCTGTTTTTT
| 376.5 | 0.3765 |
| P0.5 retina | AAAAAAAAAA (2) AAATCAATGG
| 119.8 | 0.1198 |
| P2.5 retina | AAAAAAAAAA (2) CAGACTATAA
| 330.9 | 0.3309 |
| P4.5 retina | AAAAAAAAAA (2) CAGACTATAA TCTGTTTTTT
| 299.2 | 0.2992 |
| P6.5 retina | AAAAAAAAAA (2) AAATCAATGG AATTTGAAGT (2) CAGACTATAA
| 280.1 | 0.2801 |
| P10.5 crx- retina | AAAAAAAAAA (2) CAGACTATAA
| 48.3 | 0.0483 |
| P10.5 crx+ retina | AAAAAAAAAA (2) AATTTGAAGT (2) CAGACTATAA
| 105.7 | 0.1057 |
| Adult retinal | AAAAAAAAAA (2) AAATCAATGG CAGACTATAA TCTGTTTTTT
| 64.9 | 0.0649 |
| ONL | AAAAAAAAAA (2) AAATCAATGG AATTTGAAGT (2) CAGACTATAA
| 112.9 | 0.1129 |